Gene Information

Name : CSE_01430 (CSE_01430)
Accession : YP_005472372.1
Strain : Caldisericum exile AZM16c01
Genome accession: NC_017096
Putative virulence/resistance : Virulence
Product : OmpR family two-component system response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 128773 - 129441 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
ATGAGAATACTCCTTGTTGAAGATGAAAAACCTCTTGCAAATGCAATAAAAGAAGGACTTACAGAAAATAATTTTATTGT
CGATGTTGCTTATGATGGGGATTCTGCCTTATCAAAAATAGAAATTGAAGAGTCTTACGATCTTATTATCCTTGACATAA
TGCTTCCAAAACTCGATGGTATTACGCTTCTTAAAAAGATAAGAGAACTCAAATACACAATGCCTGTTTTGATGCTTACA
GCAAAAGGCGAAATCGAAACAAAGGTTAAAACATTTGGCCTTGGGGGAGATGATTACCTTACAAAGCCATTTGACTTTAG
AGAACTTTTAGCAAGGGTGCATGCACTTCTAAGAAGGACAAAGGATGTAAAAACGAGTGTTATAAAGATTGAAGACCTTG
AAATAGATACCGAAAAAATGATTGTAACAAGAGGTGGAAAAATTATTAACCTAACAAAAAAGGAATACCAGATACTTCTA
TATCTTTGTATGAACAGGGGAAGAATTGTAGAAAAAAGAGAACTTGAAAATCATCTCTGGGATGAAAATTCAACGCCATG
GTCTGACACTCTGAGGACTCACATCAAGAACATAAGAAGAAAAGTTGATTCAGGCTTTGAGCATAAACTCATAAAAACAA
TACCAGGGGTAGGTTATGAAATTGAGTGA

Protein sequence : 
MRILLVEDEKPLANAIKEGLTENNFIVDVAYDGDSALSKIEIEESYDLIILDIMLPKLDGITLLKKIRELKYTMPVLMLT
AKGEIETKVKTFGLGGDDYLTKPFDFRELLARVHALLRRTKDVKTSVIKIEDLEIDTEKMIVTRGGKIINLTKKEYQILL
YLCMNRGRIVEKRELENHLWDENSTPWSDTLRTHIKNIRRKVDSGFEHKLIKTIPGVGYEIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-37 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSE_01430 YP_005472372.1 OmpR family two-component system response regulator BAC0111 Protein 6e-39 43
CSE_01430 YP_005472372.1 OmpR family two-component system response regulator BAC0197 Protein 3e-39 43
CSE_01430 YP_005472372.1 OmpR family two-component system response regulator BAC0638 Protein 6e-34 43
CSE_01430 YP_005472372.1 OmpR family two-component system response regulator AE015929.1.gene1106. Protein 1e-28 41
CSE_01430 YP_005472372.1 OmpR family two-component system response regulator AF130997.1.orf0.gene Protein 5e-28 41
CSE_01430 YP_005472372.1 OmpR family two-component system response regulator BAC0125 Protein 5e-39 41
CSE_01430 YP_005472372.1 OmpR family two-component system response regulator BAC0308 Protein 1e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CSE_01430 YP_005472372.1 OmpR family two-component system response regulator VFG0596 Protein 1e-37 42