|
Name : lysS (CSE_12460) Accession : YP_005473475.1 Strain : Caldisericum exile AZM16c01 Genome accession: NC_017096 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1201020 - 1202510 bp Length : 1491 bp Strand : - Note : protein synonym:lysine--tRNA ligase DNA sequence : ATGGAACTTCCAAACCTAAACGAAGTAGAGAGAAAGAGGGCAGAATTAGTCCAAATTTTAAAGGCTTCAGGCGTAGATCC GTATGGGCGAAGATTTATAACGTCTTTTAATAATAAATATCTTAAAGATCATTTTGATGAACTTATAGACAAAGTTATTG AAGCACGTGGCAGAATAATGGCTATAAGAGGTCATGGAAAAGCAAGTTTTGTAGTTCTGAGAGATTTTTCATCTGATATT CAACTATACTTCAGGCTCGATAACCTTGGGGAAGAAAAGTATAATTTCTTTAAGAAAGCAATAGACATAGGCGACTTTAT TGGAGTTAAAGGAAAACTTTTTAAAACTCATACGGGCGAAATAACAATTGAGGTAACAGATTTCGAACTTCTTACAAAGG CAATAAAAGTACTTCCAGAGAAATATCATGGTCTTAAGGACACCGAACTTAGATATAGAAGGCGATACCTTGATTTAATT GCAAATAGAGACGTCCTTGAAACATTCGTCAAAAGAAGCAAAATTATCCAAAAGATAAGGGAAGTTTTCGATAAGAGCGG TTTTATTGAAGTTGAAACACCCATGTTGCAGCCAATTGCTGGTGGTGCATCGGCAAGGCCATTCAAGACTTACTACAACG CACTTGACCAAGAGATGTATTTGAGAATTGCACCAGAACTTTATTTAAAGCGTTTGATTGTTGGAGGATTTGAGAAAGTT TATGAAATAAATAGGAACTTTAGAAACGAAGGTATTTCAACAAAGCACAATCCTGAATTTACCATGCTCGAAGCCTATTG GGCTTATGCAGATTACACAGACGTGATGAATTTTGTAGAAAATCTTCTTTACGAAGTTGCACTTTCTGTAAATGGGACAC CAAAGGTGACATTTTTAGGGCATGAAATTGACTTTACTCCACCCTTCAGAAGGATAAAGTTTGAAGAGGCACTTAATGAA TATGCAGGAGTGACTCTTGAAGAGTTAAGAGATTTAAGTAATGCACAGAGTATTTTAAATAGGCTCGATATCAAGATGGA CAAGCCACTTACTGTTGGGAACCTCATCAACGAAGTCTTTGATAAGAAGGTTGAAGAACATCTCATACAGCCAACTTTTG TTTATGAATTCCCAATCGAAATATCTCCACTTGCAAAAAGAACTTCATACGATCCTCATATGGTTGACAGATTTGAGCTC TTTATAGGCGGTCTTGAACTTGCAAATGCATTCTCTGAGTTAAACGATCCACAGGACCAATATGAGCGATTCTATGAGCA GATGGAAGCAAAGAAAAAGGGTGATGTTGAAGCGCAGGAAATGGATATGGACTATATCGAGGCAATGGAGTATGGTTTGC CACCAACTGGTGGGCTTGGAATAGGGATCGATAGGCTTGTAATGATTTTAACAGGCAAAGATTCAATAAGAGAAGTAATT CTTTTCCCACAACTTAAGAAAAAAGAGGTTAATGAAAAAGAAGAAGAGTAG Protein sequence : MELPNLNEVERKRAELVQILKASGVDPYGRRFITSFNNKYLKDHFDELIDKVIEARGRIMAIRGHGKASFVVLRDFSSDI QLYFRLDNLGEEKYNFFKKAIDIGDFIGVKGKLFKTHTGEITIEVTDFELLTKAIKVLPEKYHGLKDTELRYRRRYLDLI ANRDVLETFVKRSKIIQKIREVFDKSGFIEVETPMLQPIAGGASARPFKTYYNALDQEMYLRIAPELYLKRLIVGGFEKV YEINRNFRNEGISTKHNPEFTMLEAYWAYADYTDVMNFVENLLYEVALSVNGTPKVTFLGHEIDFTPPFRRIKFEEALNE YAGVTLEELRDLSNAQSILNRLDIKMDKPLTVGNLINEVFDKKVEEHLIQPTFVYEFPIEISPLAKRTSYDPHMVDRFEL FIGGLELANAFSELNDPQDQYERFYEQMEAKKKGDVEAQEMDMDYIEAMEYGLPPTGGLGIGIDRLVMILTGKDSIREVI LFPQLKKKEVNEKEEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-99 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005473475.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-99 | 50 |
