Gene Information

Name : Ferpe_0080 (Ferpe_0080)
Accession : YP_005470361.1
Strain : Fervidobacterium pennivorans DSM 9078
Genome accession: NC_017095
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 89040 - 89762 bp
Length : 723 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGGCAAAAAAGACGATTATGGTTATCGACGACCAGCCTGAGATTCTCGAATTGGTTAGCTTTACTTTACAAAAAGAGGG
GTACGAGGTCATCCCAGTGGAGGATGCTGAAAAAGCGTTACAAGAGCTGAAAGATAAAGACGTTGACATGTTTATTGTTG
ACATTATGCTTCCAAACATGGATGGTTTCGAATTCGTAAGACACATTCGTGCAACGGAAAAACACAAACTAACTCCTGTA
ATATTCCTCAGCGCAAAGGGAGAAGAATTTGACAAAGTGCTCGGTTTAGAACTCGGTGCGGACGATTACATAGTTAAACC
GTTCAGCATCAGGGAACTCCTTGCAAGGATTAGAGCAGTCTTCAGAAGGATGCAACTTGGAAACGTTGTAAAAGAGGAGA
AGCCAAAGAAGATAGTTGCAAAAGACCTCGAAATCGATATCGACAAATACGAAGTTAGGGTAAAGGGTAAGAAAGTTAGC
CTTACACCACTTGAATTTGACTTACTCAGATTCCTTGCCGAAAACGAAGGAAAGGTCTTTTCAAGAGATGTACTTCTTGA
CAAACTTTGGGGTTACGATTACTTCGGTGATACAAGAACCGTCGACGTACACATCAGAAGGTTGAGAACAAAAATTGAGG
AAGATCCTTCAAATCCAAGGTATGTCGTAACTGTGCGTGGAAAAGGATACAAATTTAGAGATCCTGGAAAGGAAGAACAA
TAA

Protein sequence :
MAKKTIMVIDDQPEILELVSFTLQKEGYEVIPVEDAEKALQELKDKDVDMFIVDIMLPNMDGFEFVRHIRATEKHKLTPV
IFLSAKGEEFDKVLGLELGADDYIVKPFSIRELLARIRAVFRRMQLGNVVKEEKPKKIVAKDLEIDIDKYEVRVKGKKVS
LTPLEFDLLRFLAENEGKVFSRDVLLDKLWGYDYFGDTRTVDVHIRRLRTKIEEDPSNPRYVVTVRGKGYKFRDPGKEEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-41 46
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-41 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 9e-50 48
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 1e-47 47
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 5e-44 45
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 2e-51 45
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 4e-43 44
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 6e-47 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 8e-47 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 8e-47 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 8e-47 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 8e-47 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 9e-47 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 6e-47 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 8e-47 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 8e-47 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 8e-47 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 2e-40 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 2e-40 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 2e-40 43
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 7e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 1e-41 46
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 3e-41 45
Ferpe_0080 YP_005470361.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 6e-31 42