|
Name : Ferpe_0052 (Ferpe_0052) Accession : YP_005470333.1 Strain : Fervidobacterium pennivorans DSM 9078 Genome accession: NC_017095 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 61601 - 62881 bp Length : 1281 bp Strand : + Note : PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain DNA sequence : ATGATAGATCTCAAATTACTGAGAAAGAATCCAGAGTTATTCTACGAAGCAATTAGAAAAAGAAATTATTCTACTGAAAT CCTTGACAAAATTGTGGAACTTGACAGAGAGTGGAGAAATTACGTAAATATCGTCAACAACCTAAAAGCAAAAAGAAATG AACTCTCTAAGATAGTTGCAAAATTAAAGGCAGAAGGCAAGAACGAAGAAGCGAATGAAATAATCGCCGAAAGCAAGAAA CTTGGCGATGAAATTGCTCAATACGAGGCGAAAGAAAAAGAACTGGAAGACCAAATGTACAACTTGGCACTTTACGTACC AAACGTTCCACACGAAAGTGTGCCTGTTGGAAAGGACGAAGCTGAGAATGTCGAGGTTCGAAGGTGGGGCGAACCGAGGA AATTCGATTTCAAACCGAAAGCACACTGGGACCTCGGCCCTGAACTTGGCATGCTTGATTTTGACAGGGGTGCTAAGTTA AGTGGTTCGAGGTTCACTGTCATGTTTGGAGAAATTGCCAGACTTGAACGTGCTCTTGCTCAATTCATGCTTGATACTCA CACACAGAACGGATATATAGAAGTCAACGTTCCGCATTTAGTTAAAAGGGAAACGATTACTGCGACGGGCCAGCTTCCAA AATTCGCAGAAGAACTTTACACATGTGAAAGAGATGATTTATTCCTCATCCCGACCGCGGAAGTTCCACTTGCCGCGCTA CATATAGATGAAATTCTTGAAGAAAATCAACTTCCGATAAAGTACACAGCATTCACGCCATGTTACAGACGAGAAGCTGG AAGTTACGGGAAAGATGTGCGAGGTTTGATAAGGCAACATCAATTTGAAAAAGTTGAACTTGTCTGGTACACAACACCTG AACGCTCTTTTGAAGATTTGGAACAACTTACCCGCGATGCAGAGAGGATTCTCCAACTTCTTGGGTTACCTTACAGGGTT GTAGCGCTCTGCACCGGTGACCTTGGTTTTGCAGCTGCGAAAACGTATGACATAGAAGTCTGGTTGCCATCTTACAATGC ATATAAAGAAATTTCTTCTTGTAGCAACGATACCGATTTCCAAGCAAGAAGAGGCAACATGCGCTATAGAACGAAAGACG GAAAGCTCAATTACGTTCACACACTGAATGGCTCAGGTCTTGCGATAGGAAGAACACTTGTCGCTATTATGGAGAACTAT CAGAATCCTGACGGTACAATAACTGTGCCAGAAGTGCTTAGGCCTTACATGAAAACTGACGTAATAAAACCAATGAAGTA A Protein sequence : MIDLKLLRKNPELFYEAIRKRNYSTEILDKIVELDREWRNYVNIVNNLKAKRNELSKIVAKLKAEGKNEEANEIIAESKK LGDEIAQYEAKEKELEDQMYNLALYVPNVPHESVPVGKDEAENVEVRRWGEPRKFDFKPKAHWDLGPELGMLDFDRGAKL SGSRFTVMFGEIARLERALAQFMLDTHTQNGYIEVNVPHLVKRETITATGQLPKFAEELYTCERDDLFLIPTAEVPLAAL HIDEILEENQLPIKYTAFTPCYRREAGSYGKDVRGLIRQHQFEKVELVWYTTPERSFEDLEQLTRDAERILQLLGLPYRV VALCTGDLGFAAAKTYDIEVWLPSYNAYKEISSCSNDTDFQARRGNMRYRTKDGKLNYVHTLNGSGLAIGRTLVAIMENY QNPDGTITVPEVLRPYMKTDVIKPMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-104 | 53 |
