Gene Information

Name : Ferpe_0424 (Ferpe_0424)
Accession : YP_005470683.1
Strain : Fervidobacterium pennivorans DSM 9078
Genome accession: NC_017095
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 442702 - 445188 bp
Length : 2487 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif

DNA sequence :
ATGTTCGATAGGTTTTCTGAAAGGTCTGCGAAGGTTTTTGTTATGGCTCAAGAGGAAGCGAAAGACCTCGGTCACTCATA
CGTAGGAACCGAGCATTTGTTGCTTGCAATACTAAAGTTGAATGATAAACCTCTTGCAAATATCTTAGAGAGGTATGGCT
TGACATACGCACGTGTCAAGAACGAGGTCATTTCGATAGTTGGTTTAGGTATGCGGGGATTCATTATGTCTCCGCAAATG
ACCCCACGAGCAAGGAAAGTTACTGAGATTGCTTTTGAAGAAGCCCGTATGATGGGTAGCGACAAGATAGACCCTGAACA
CTTGCTTTTGGGTATACTGCGTGAGGGTGAAGGTATTGCAATTCATATTTTGAAAAAGCTCAACGTGAATATTCAAGCAT
TGCGTAAGGAGATAACTGAAAATATCTCCGATGAGGATTTCTATGAAGAAAGCCAAGCGCTTCCACCGTCTTACGAAGAA
CCAACAACTTCTCCAGCTGTTCGTCAACTCGAGGGGTTTGGCGTTGATTTGACAGCGCAAGCGCAGCGTGGCGAACTTGA
CCCAGTGATTGGAAGGGAAAATGAAATCGAAAGGCTTATGCAAATTCTCGTTAGGAGAAAGAAGAACAATCCTGTGCTTA
TTGGAGAGCCGGGTGTAGGTAAAAGTGCAATAGTTGAAGGATTGGCGCAAAGGATAGTGTCCGGTGAGGTGCCGGAACCG
TTGAAGGGCAAGACTATATTCTCTCTCGACGTGGCTGCACTCGTTGCCGGTACGAAATACCGCGGTGAATTTGAAAAGAG
GATGAAGAAGTTACTTCAAGTCGTTAAAGGGAACAAAGATATAATTCTTTTCATAGATGAGCTCCATATGATAGTAGGGG
CAGGCTCTGCCGAGGGTGCTGTTGATGCGGCGAATATTCTTAAACCAGCCTTGGCACGTGGAGAACTCCACTGTATTGGG
GCAACGACACCCGACGAATACAGAAAATACATAGAAAAGGATGCAGCTCTTGAAAGAAGGTTTCAGAAAATATACGTTCA
AGAACCAAGTCCACAAATGGCGTTGGAGATATTGAAAGGTTTGAAATCAAAATACGAAAGCCATCATAAAGTAAAATACA
CAGATAAAGCACTCGAGGCAGCAGTATATTTGTCCCAAAGATATATCACAGACCACTTTTTACCGGATAAAGCTATTGAT
GTTATTGACGAGGCAGGAGCCAGAAGCAGGCTGAAATTATTCGTTATGCCAAGCCACCTTCAACTTTTAAAACTCCAGAT
AGAGTCTGTTAAGAACGAGAAAGAAGAAGCGGTAGCCGCTCAGGATTACGAAAAGGCAGCGGAGCTGAAAGAGAAAGAAC
AGCAGCTCAAGGAGCAATTCAACGAAGCCTACAGCAACTGGCGTAAACAAGTTGAATCTACAATCGTTACAGTTGATGTT
CCTGAGATAGAAGAAGTTGTGGCAGGTTGGACTGGAATTCCTCTCAAAAAACTTGAAGAGACTGAGAGGGAGAAGCTTCT
CAATCTTGAGAATGCATTGCACGAAAGGGTTGTTGGCCAGGAAGAAGCAATCAGTGCAATTGCACGCGCTATTCGTAGGG
CAAGAAGCGGTTTAAAAGACCCAAGAAGACCTGTTGGCGTTTTCCTGTTCCTCGGACCGACTGGTGTTGGTAAGACTGAG
CTTGCTAAAGCACTTGCAGAATATCTGTTCGGCGATGAAAAAGCTTTGGTACGGTTCGACATGAGTGAGTATATGGAAAA
ATTCTCAGTCTCCAGGTTGATAGGTGCACCTCCAGGATACGTTGGGTATGAAGAAGGAGGAACACTAACAGAGAAGGTAA
GGAGAAGACCGTTCTCGGTAATACTTTTTGACGAGATAGAAAAGGCTCATCCTGATGTGTTCAATATATTACTCCAGATA
ATGGATGATGGACGTTTGACAGATTCACAAGGTCACGTTGTTGATTTCAGAAATACCATTATAATCATGACAAGTAACAT
CGGCGGAACTGAAATAGTTACTTCCAAGAAAAACCTCGGATTCGTTGGTGAAGAAACTCATGAAAGAGACTTCAAAGAGA
TGAAAGATAAAGTGCTCGAAGAAGTGAAAAAAGTCTTCAAACCAGAGTTTATAAACAGAGTTGATGAAATTATCGTATTC
CATAAACTTACAAAAGAACACATCGAACAGATTATCGAAATACTGCTCAAAGACATCAGAGCAAGGTTAAGCGAAAGACA
CATCACCTTAGTGCTTTCGCCAGAAGCAAAAGATTTCTTGGTTAGCGTTGGTTACGATGCGGTTTATGGTGCAAGACCAT
TGAAGAGAGCTATTCAAAAGTACATAGAGGACCCACTCTCTGAGGAGTTGCTGAGAGGTGAAGTTGAGGATAACGACGAA
GTATATGTCGTTCGTGATGGTGATAAACTTGCTTTCATAAAAAACAAACAAAATCAAGTTGCAACGACTGTCAAGTCCGA
ATCGTAG

Protein sequence :
MFDRFSERSAKVFVMAQEEAKDLGHSYVGTEHLLLAILKLNDKPLANILERYGLTYARVKNEVISIVGLGMRGFIMSPQM
TPRARKVTEIAFEEARMMGSDKIDPEHLLLGILREGEGIAIHILKKLNVNIQALRKEITENISDEDFYEESQALPPSYEE
PTTSPAVRQLEGFGVDLTAQAQRGELDPVIGRENEIERLMQILVRRKKNNPVLIGEPGVGKSAIVEGLAQRIVSGEVPEP
LKGKTIFSLDVAALVAGTKYRGEFEKRMKKLLQVVKGNKDIILFIDELHMIVGAGSAEGAVDAANILKPALARGELHCIG
ATTPDEYRKYIEKDAALERRFQKIYVQEPSPQMALEILKGLKSKYESHHKVKYTDKALEAAVYLSQRYITDHFLPDKAID
VIDEAGARSRLKLFVMPSHLQLLKLQIESVKNEKEEAVAAQDYEKAAELKEKEQQLKEQFNEAYSNWRKQVESTIVTVDV
PEIEEVVAGWTGIPLKKLEETEREKLLNLENALHERVVGQEEAISAIARAIRRARSGLKDPRRPVGVFLFLGPTGVGKTE
LAKALAEYLFGDEKALVRFDMSEYMEKFSVSRLIGAPPGYVGYEEGGTLTEKVRRRPFSVILFDEIEKAHPDVFNILLQI
MDDGRLTDSQGHVVDFRNTIIIMTSNIGGTEIVTSKKNLGFVGEETHERDFKEMKDKVLEEVKKVFKPEFINRVDEIIVF
HKLTKEHIEQIIEILLKDIRARLSERHITLVLSPEAKDFLVSVGYDAVYGARPLKRAIQKYIEDPLSEELLRGEVEDNDE
VYVVRDGDKLAFIKNKQNQVATTVKSES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ferpe_0424 YP_005470683.1 chaperone ATPase VFG0079 Protein 0.0 55
Ferpe_0424 YP_005470683.1 chaperone ATPase VFG0080 Protein 3e-141 52