Gene Information

Name : Ferpe_0236 (Ferpe_0236)
Accession : YP_005470504.1
Strain : Fervidobacterium pennivorans DSM 9078
Genome accession: NC_017095
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 248112 - 248828 bp
Length : 717 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGCAAAAAAATTTTAATGCCACGAATGAACTGAAAGAAATCATAGTGAAAGCCGAAAATCTTTCCAAAATCTACGGTTC
TGGTAGTTCAAAAGTCGTAGCACTCGATTCTGTGAATTTGGAGATATACAAAGGAGAAATCGTTGCAATACTTGGCCCGT
CTGGCTCTGGAAAGACCACTCTATTGAACTTGCTGGCAGGTCTTGATATTCCAACTTCAGGTACAATAATTATAGACGGA
CAGGAAATAACAAAAATGTCTGAAGAAGAGAAAGCGAAATTCAGAGCAAAGAGTATGGGGTTTATATTCCAGTTTTTCAA
CCTTATTCCCGTTCTAACTGCTGTTGAGAACGTAGAACTACCTCTTCTTCTTAATAAAGTTCCAGTCACAGAAGCACGAA
AAAGGGCTTTAGAACTGCTCGAATTTATGGGAATCTCTCACAGAAAAGATGCGTATCCTTCGCAGTTGTCAGGTGGTGAG
CAACAAAGAGTTTCCATCGCTCGTGCACTTTCAACAACCCCAAAAATCATCTGGGCTGACGAACCAACAGGTGCATTGGA
TGTGAAAAATGGAGAGCAAATCAAAAAGTTGATAATCGAGCTTAACAAAGAATTTGGAACAACTTTTGTCATAGTAACAC
ATGATCAAAATGTTGCACAAATTGCGAACAGAATCATGAGAATGGAAAATGGTAGAATAATCGAAGTTATAGGTTAA

Protein sequence : 
MQKNFNATNELKEIIVKAENLSKIYGSGSSKVVALDSVNLEIYKGEIVAILGPSGSGKTTLLNLLAGLDIPTSGTIIIDG
QEITKMSEEEKAKFRAKSMGFIFQFFNLIPVLTAVENVELPLLLNKVPVTEARKRALELLEFMGISHRKDAYPSQLSGGE
QQRVSIARALSTTPKIIWADEPTGALDVKNGEQIKKLIIELNKEFGTTFVIVTHDQNVAQIANRIMRMENGRIIEVIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-35 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ferpe_0236 YP_005470504.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-41 48
Ferpe_0236 YP_005470504.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 3e-42 47
Ferpe_0236 YP_005470504.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 5e-36 46
Ferpe_0236 YP_005470504.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 3e-43 45
Ferpe_0236 YP_005470504.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-42 45