Gene Information

Name : Ferpe_1475 (Ferpe_1475)
Accession : YP_005471663.1
Strain : Fervidobacterium pennivorans DSM 9078
Genome accession: NC_017095
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1506968 - 1508485 bp
Length : 1518 bp
Strand : +
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain

DNA sequence :
TTGCTTAAAGATTTCAGAGAACAGCGAATCAGAGAAATTGAAGAACTTCGAAAGATGGGTATAAACCCTTATCCATACTC
GTATCCAAAAACTCACACAACTGAAGACATAAAGAAACAGTTTGAACACCTTGCTAACGGAGAAGTCACCGACCAGAGAG
TATCTACAGCTGGAAGAATAATGTCTATAAGAGAACATGGCAAAAGTGCGTTCTTCCACATTAAAGATACCTACGGGCGA
ATCCAAGCTTATGTACGCAAAGATAAAACGGAGAACTTCGACTTCTTCAAGGAACATGTAACAGTTGGAGATATCATCGG
TGTTGAAGGAATTGTATTCAAGAGCAATACCGGTGAAATAACGATACTTGTCGAAAAGTTCCAGCTCTTGGTCAAACCAC
TCAGACCCATGCCTGAAAAATGGCACGGTATAAAGGACAAAGAAATTCTATACCGTCAAAGATACGTCGACATGATTGCT
AATGATGACACCATAAAAAGATTCAGAATACGCTCTGACATAATTAGAATGATACGCGAATTTTTGCACCAGAAAGGGTT
CTATGAAGTTGAGACACCTATACTACAATACCTTACAGGTGGTGCATCTGCACGTCCCTTTATCACGCACTGTAATGCGC
TAGATATCGATATGTACCTGCGAATAGCAACAGAACTACATTTAAAAAGATTCATAGTGGGTGGTTTTGACAAAGTTTAC
GAAATAGGAAGAATCTTCAGAAACGAAGGTATTTCCTACAAACACCACCCAGAATTCACTTCCATAGAGCTCTATCAAGC
TTACGCGGACTACGAGGATATGATGAACCTCACCGAAGAGCTCATAACCTATATTGTTGAAAAACTTTTTGGAACAACAA
AAATCACTTACCAAGGTCAGGAAATAGACTTCACAAGACCATGGAGAAGGATAAAAATGAGAGATTTCATAAAAGAAAAT
CTCGGTGTGGATATACTTGAAGATTCCGACGAAAAAATGCTTTCTGTTCTAAGGACTCACGGAGTTGATGTCGAAATTGA
AGATAGAGGGCACATGATAGAGAAACTTTGGGACCTTGTAGAAGACAAGGTTATCCAACCAACGTTCCTGCTTGAGCACC
CTGTGGAAATTTCACCACTCGCCAAAAAACATCGGGAAGACCCAAGGGTTACTGAAAGGTTTGAGTTAATAATTTACGGT
CGAGAAATGGCGAACGCATTTAGCGAGCTCAATGACCCTGTTGACCAACTCGAAAGGTTTATGAACCAATTAAAATTAAG
AGACCTTGGCGATGAAGAAGCGCATATGCTTGATAAGGACTTCATCAGAGCTCTTGAGTATGGAATGCCACCAACAGGTG
GACTTGGAATAGGTATCGACAGGCTTGTTATGTTGCTGACAGATAGTCCTAACATACGCGATGTCATTGCATTTCCACTT
GTTAGGCCTGAAGGCGATATCGACATAGAAGAAATTGAAATCTCTGAGAAAGCAGAAGAAGGGGGAGATAGAGTATGA

Protein sequence :
MLKDFREQRIREIEELRKMGINPYPYSYPKTHTTEDIKKQFEHLANGEVTDQRVSTAGRIMSIREHGKSAFFHIKDTYGR
IQAYVRKDKTENFDFFKEHVTVGDIIGVEGIVFKSNTGEITILVEKFQLLVKPLRPMPEKWHGIKDKEILYRQRYVDMIA
NDDTIKRFRIRSDIIRMIREFLHQKGFYEVETPILQYLTGGASARPFITHCNALDIDMYLRIATELHLKRFIVGGFDKVY
EIGRIFRNEGISYKHHPEFTSIELYQAYADYEDMMNLTEELITYIVEKLFGTTKITYQGQEIDFTRPWRRIKMRDFIKEN
LGVDILEDSDEKMLSVLRTHGVDVEIEDRGHMIEKLWDLVEDKVIQPTFLLEHPVEISPLAKKHREDPRVTERFELIIYG
REMANAFSELNDPVDQLERFMNQLKLRDLGDEEAHMLDKDFIRALEYGMPPTGGLGIGIDRLVMLLTDSPNIRDVIAFPL
VRPEGDIDIEEIEISEKAEEGGDRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 7e-98 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ferpe_1475 YP_005471663.1 lysyl-tRNA synthetase VFG1668 Protein 4e-98 47