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Name : LFE_0359 (LFE_0359) Accession : YP_005468211.1 Strain : Leptospirillum ferrooxidans C2-3 Genome accession: NC_017094 Putative virulence/resistance : Unknown Product : type I sitespecific deoxyribonuclease, HsdR family Function : - COG functional category : - COG ID : - EC number : - Position : 351038 - 354106 bp Length : 3069 bp Strand : + Note : - DNA sequence : ATGACCGCCCTCACCGAATCCGACCTGGAACAGATCGTCCTCGGCTGGTTCGGCGAGCTGGGATACACGATCCTCCATGG CCCGGAGATCGCACCCGAAGCCAGCCTCTCCGAGCGTTCCTCGTACTCCGACCCGCTCCTCCCCGCCCACGTTCAAATTG CTCTTTCCCGTCTCAATCCCTCCCTTCCTCCCGAAGCTCTCGACGACGCCTTTCGAAAGCTCACCCGGATTGATTCTCCC ACCCTGATCCAGCGCAATCATGCCTTCCACCGCTTTCTTGTGGAGGGGATCCCTGTCGAATACCGTACCCAGGACCGGAT CGTCTCCGATTCTGCCCGGCTTTTTGACCTTGCCGATCTTGAAAACAACGACTGGCTGGTGGTCAACCAGTTCACCGTTG TGGAAGGACACCACAATCGGCGTCCCGATATCGTTGTCTTCGTGAACGGGATCCCTCTGGGGGTAATCGAGCTCAAGAAT CCCGGAGACGAAAAGGCCACGATCTGGTCGGCCTTCAACCAGATCCAGACCTACAAGGAAGAGATCCCGTCCCTCTTTGC CTTCAATGAACTTCTCGTAATCTCGGACGGCTACGAGGCCCGGATCGGCTCTCTCTCCTCAAATAAGGAGCGCTTTGCTC CCTGGCGAACGATCGAGGGCGAGGAAGAAGCCCGAATGCGTCCCCCCATAGAGGTTCTGACAAAAGGCGTCTTCCGAAAA GAGCACCTCCTGGATCTTGTCTCCCACTTTGTTGTTTTCGAGGCGGAAACCGACGGGAGTCTGATCAAGAAACTGGCCGG ATACCACCAGTTCCATGCCGTGAACAAGGCGGTTGAGACGACCTTGACGGCTTCCCGGCCAAAGGGAGACCGGAGGATCG GGGTGATCTGGCATACCCAGGGCTCCGGGAAGAGCCTCACCATGGTCTTCTATGCCGGGAAGGTCGTCCTTCACCCGGCC ATGGAAAACCCCACTCTGTTAGTTCTCACCGACCGGAACGATCTCGACGGCCAACTGTTCGGGACCTTCTCCCGGTGCCA GGAGATTCTCCGCCAGACTCCCGTCCAGGCCGACGCACGGCAAAGACTCCGGGAGCTATTGCGGGTGGCCTCCGGTGGTG TGGTCTTTACGACGATCCAGAAGTTTTTCCCGGATCCGGAGAGGGACGGGGACACCTTCCCCAGGCTCTCGGACCGCCGG AATATTGTGGTGATCGCCGACGAAGCCCACCGAAGCCAGTACGACTTCATGGACGGCTTTGCCCGGCACATGCGGGACGC TCTTCCCAACGCTTCTTTTATCGGGTTCACGGGAACGCCGGTGGAGCTTTCTGACCGGAACACCAAGGCGATCTTCGGAG ACTATATCAGCGTCTACGATATCCAGCGGGCCGTGGACGACGGAGCCACCGTCCCGATTTACTACGAATCCCGCCTGGCC AGGCTCGACCTTCCGGAGGCCGAGAAGCCCCATATCGACCAGGAATTCGAGGAGGTGACCGAGACCGAGGAGGAGGAGCG CAAGGAGAAGCTGAAATCCAAATGGGCGGCTCTTGAAGCGGTGGTCGGAACAGAAAAACGGATCGGGCTCATTGCCAAGG ATATTGTCGACCATTTTGAAAAACGCCTGGAAGCCCTTGACGGCAAGGCCATGATCGTGGGCATGAGCCGCCGGATCTGT CTCGACCTCCACAAAGCCCTGATCACACTCCGTCCCGAGTGGTATGACAAGGACGACACAAAGGGAATTTTAAAGGTCGT CATGACGGGAAGCGCCACCGATCCGGTCGAATGGCAGGAGCATATCCGGAACAAGCCCCGGCGGGAAAAATTGGCCAACC GCTTCCGGAACCCCAACGATCCCTTCCGGATCGTGATCGTCCGGGACATGTGGCTCACGGGGTTTGACGCGCCGTCCCTT CACACCATGTACCTCGACAAGCCTATGCGGGGCCATGGTCTCATGCAGACGATCGCCCGGGTCAACCGGGTCTTCAAGGA CAAGCCGGGCGGCCTGATCGTCGATTATCTGGGGATTGCCCATGAACTGAAGACCGCCATGGCGACCTACACCCAAAGCG GGGGAAGCGGAAAGCCCACCTTGGACCAGGACGACGCCGTGGCCGCTCTCTTGAAGCACTACGAGATCTGTTGCGGACTC TTCCATGGGTTCGACTGGAGTTCTGGAAAACAATCGCCCGAAAAACGCCTGTCCCTTCTGCCCTTTGCCCAGGACCATAT TCTGTCCCAGGAGAACGGTCAGAAGAGACTGGCCAAGGCGGTCTCCGACCTGTCCAAAGCGTTTGCCCTGGCGGTTCCGC ACCCCAGGGGCATTGAAATCCGGGACGACGTGCGGTTCTTCCAGGAGGTCAACGCCGTTTTAACGAAGAGCGGTCCGTCC TCGGGGAGAGATCCGGGAGACATGGACCATGCGATCCGGCAGATCGTCTCGGGAGCAATCGTCTCGGAGGGGGTGATCGA TATCTTCGAGGCGGCGGGACTCATGCGTCCCGACCTGTCGATCCTCTCCGAAGAATTTCTGGCCGACGTCCGGAATATGC CGCAGAAGAACCTGGCCGTGGAACTTCTGCGAAAGCTTCTCGACAACGAGATCAAAACCCGGTCACGGAAAAATGTCGTC CTGTCCCGGTCGTTTTCCGAAATGCTGGAAAAGACTTTGCGGGCCTATCACAACCGGGCGATCGAGACGGTCCAGGTCAT TGAAGAGCTGATCACGCTGGCCGGAGAGATCCGGAAAGCCGAAAAACGGGGAGAGGACCTGGGGCTTTCGGAAGACGAAG TGGCCTTCTACGACGCCCTGGAGACGAACGACAGCGCGGTGAAGATCCTGGGGGACAAGGTTCTATGCGAGATCGCCCGG GAGCTGGTCCAGACGATCCGGAACAACGTGACGGTGGACTGGTCGATCCGGGAGGACAGACGGGCGCATATTAAGCGCCT GGTGAAGAGGATTCTCAAGAAGAACGGCTACCCTCCGGACAAGCAGGAGAAGGCGACGGAGACGGTATTGGAGCAGGCGG AGACATTGTGTCAGGATTGGGTGGCATGA Protein sequence : MTALTESDLEQIVLGWFGELGYTILHGPEIAPEASLSERSSYSDPLLPAHVQIALSRLNPSLPPEALDDAFRKLTRIDSP TLIQRNHAFHRFLVEGIPVEYRTQDRIVSDSARLFDLADLENNDWLVVNQFTVVEGHHNRRPDIVVFVNGIPLGVIELKN PGDEKATIWSAFNQIQTYKEEIPSLFAFNELLVISDGYEARIGSLSSNKERFAPWRTIEGEEEARMRPPIEVLTKGVFRK EHLLDLVSHFVVFEAETDGSLIKKLAGYHQFHAVNKAVETTLTASRPKGDRRIGVIWHTQGSGKSLTMVFYAGKVVLHPA MENPTLLVLTDRNDLDGQLFGTFSRCQEILRQTPVQADARQRLRELLRVASGGVVFTTIQKFFPDPERDGDTFPRLSDRR NIVVIADEAHRSQYDFMDGFARHMRDALPNASFIGFTGTPVELSDRNTKAIFGDYISVYDIQRAVDDGATVPIYYESRLA RLDLPEAEKPHIDQEFEEVTETEEEERKEKLKSKWAALEAVVGTEKRIGLIAKDIVDHFEKRLEALDGKAMIVGMSRRIC LDLHKALITLRPEWYDKDDTKGILKVVMTGSATDPVEWQEHIRNKPRREKLANRFRNPNDPFRIVIVRDMWLTGFDAPSL HTMYLDKPMRGHGLMQTIARVNRVFKDKPGGLIVDYLGIAHELKTAMATYTQSGGSGKPTLDQDDAVAALLKHYEICCGL FHGFDWSSGKQSPEKRLSLLPFAQDHILSQENGQKRLAKAVSDLSKAFALAVPHPRGIEIRDDVRFFQEVNAVLTKSGPS SGRDPGDMDHAIRQIVSGAIVSEGVIDIFEAAGLMRPDLSILSEEFLADVRNMPQKNLAVELLRKLLDNEIKTRSRKNVV LSRSFSEMLEKTLRAYHNRAIETVQVIEELITLAGEIRKAEKRGEDLGLSEDEVAFYDALETNDSAVKILGDKVLCEIAR ELVQTIRNNVTVDWSIREDRRAHIKRLVKRILKKNGYPPDKQEKATETVLEQAETLCQDWVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 50 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 47 |
