|
Name : LFE_0347 (LFE_0347) Accession : YP_005468199.1 Strain : Leptospirillum ferrooxidans C2-3 Genome accession: NC_017094 Putative virulence/resistance : Unknown Product : N-6 DNA methylase Function : - COG functional category : - COG ID : - EC number : - Position : 342944 - 344515 bp Length : 1572 bp Strand : + Note : - DNA sequence : ATGGCAAGAAAAGGCAATCAAAAACTTGACAGTTCCCCCCTCGGTCTCGAAACCAAGCTTTGGCAAGCCGCCGACAAGCT CCGGAACAACATGGACGCCGCCGAATACAAGCATGTCGTCCTGGGGCTCCTCTTCCTGAAATACGTCTCCGACTCCTTCG AGGAACACCACGCCAAGCTGACGAGTGAAATCTCCCAGGGAGCCAACCCCGAAGATCCGGACGAGTACCGGGCGGACAAT GTGTTCTGGGTTCCCAAAGAGGCCCGCTGGTCGGTTCTCCAGTCCAACGCCAAGCGTCCCGAGATCGGCAAGGTGATCGA CGACGCCATGGTGGCAATCGAACGGGACAACAAGTCGTTGAAAGCCGTTCTTCCCAAAGACTTTGCCCGTCCGGGTCTCG ACAAGCAACGTCTGGGAGAACTGATTGACCTGGTGGGAACGATCGGCCTGGGAGACAAGGAACACCGTTCCCGGGACATG CTGGGACGGGTCTATGAATATTTCCTCTCCCGGTTTGCCAGTGCCGAAGGAAAGAAGGGGGGACAGTTCTACACTCCCCG CTCCGTGGTCCGGGTTCTGGTGGAAATGCTGGCCCCCTACAAGGGGCGGGTCTACGATCCCTGCTGTGGATCCGGCGGCA TGTTCGTTCAATCCGAGAAATTCATTGAGGTCCATGGAGGCCGGATCGGGGATATCAGTATCTACGGTCAGGAATCGAAC CACACGACCTGGAAACTGGCCGCCATGAATCTGGCTATTCGGGGCATTGCCGCCAATCTTGGAAAAGAGAACGCCGACAG TTTCCACCGGGATCTCCACCCCGACCTGAAGGCCGACTATATTCTGGCCAATCCTCCGTTCAATTCGAGCGACTGGGGAG GCGACCGGCTCCGGGAAGACAAACGCTGGGTTTATGGAGTTCCTCCCGGGGGAAACGCTAACTTCGGCTGGGTCCAGCAC TTCATATCCCACCTGGCCCCCAATGGGGTGGCGGGGTTCGTTCTGGCGAATGGCTCCCTGTCTTCGAATCAGAGCGGGGA AGGAGAAATCCGCAAAAATATCGTCGAGGCCGACGTGGTGGATTGCATTGTCGCCATGCCGGGACAGCTCTTCTATTCGA CTCAAATTCCGGTCTCCCTCTGGTTTGTTTCAAGAAACAAGAAAAACGGCAAAGGCCAGGAAGGAAAACCCCTGCGGGAC CGGAGCGGAGAAATTCTCTTCATTGACGCGAGAAAGCTCGGATTCATGGCCGACCGGACCCACCGGGACCTCTCCGACGA GGATATCGCGAAGATCGCCGGAACCTACCACCACTGGCGGGGTGACGGGGCCGGACAGTACGAGAACATTCCCGGGTTTT GCAAGAAAGCAACGTTGGAAGAGGTTCGGACCCACGGGCATGTCTTGACCCCAGGAAGGTATGTCGGGGCGGAAGAGGTC GAGGGCGACGGGGAACCCTTCGAGGAGAAAATGAAGCGGCTCACGGCCCAACTGGACGAACAGTTCAAGGAGAGTGCTCG CCTGGAAGCGGAAATCAGAAGTAATCTGTCGAAGCTGGGCTATGGACTGTAA Protein sequence : MARKGNQKLDSSPLGLETKLWQAADKLRNNMDAAEYKHVVLGLLFLKYVSDSFEEHHAKLTSEISQGANPEDPDEYRADN VFWVPKEARWSVLQSNAKRPEIGKVIDDAMVAIERDNKSLKAVLPKDFARPGLDKQRLGELIDLVGTIGLGDKEHRSRDM LGRVYEYFLSRFASAEGKKGGQFYTPRSVVRVLVEMLAPYKGRVYDPCCGSGGMFVQSEKFIEVHGGRIGDISIYGQESN HTTWKLAAMNLAIRGIAANLGKENADSFHRDLHPDLKADYILANPPFNSSDWGGDRLREDKRWVYGVPPGGNANFGWVQH FISHLAPNGVAGFVLANGSLSSNQSGEGEIRKNIVEADVVDCIVAMPGQLFYSTQIPVSLWFVSRNKKNGKGQEGKPLRD RSGEILFIDARKLGFMADRTHRDLSDEDIAKIAGTYHHWRGDGAGQYENIPGFCKKATLEEVRTHGHVLTPGRYVGAEEV EGDGEPFEEKMKRLTAQLDEQFKESARLEAEIRSNLSKLGYGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 1e-164 | 65 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 1e-164 | 65 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 2e-164 | 64 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 4e-123 | 51 |
