Gene Information

Name : LFE_2274 (LFE_2274)
Accession : YP_005470076.1
Strain : Leptospirillum ferrooxidans C2-3
Genome accession: NC_017094
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2335978 - 2337471 bp
Length : 1494 bp
Strand : +
Note : -

DNA sequence :
ATGGCAGAAAACGCCCAGGATCAAAAAGGGCAGTCCCAGTCGTCAGAACAACCCACCTTCAGCGATTCCCTGATTGACGA
TCTCGTGGAGGCGACACGGCTCAAACCGGGAGACGAGGCCTACTCCATCACCCGACAGGGAGTGAAAGCCTTCATTAACG
AACTCCTCGAACCGCAGAGAGCCGTCGAAAAAGTCACCCAGGCCACCGTCGACGAAATGATCGCCGAACTCGACAAAAAA
CTCTGCCATCAGGTGGACGCCATCCTCCACAACGCGGAGTTCCAGAAGATGGAATCGGCCTGGAGATCGCTCAAGTTCCT
CGTCGACCGGACCGATTTTCGCGAAAACAACAAGATCGAGATCCTGAATGTCTCCAAACAGAAACTCCTCGAAGACTTCG
AAGACGCCCCCGAAATCACCAAATCCGGACTCTACAAGATCGCCTACACCAACGAATTCGGACAGTTTGGCGGACAGCCC
TACGGAACCATCATCGCCAACTATGAAATGAACCCCGGCCCACAGGACATCAAGCTCCTCCAGAATATCGCGAGCGTCGC
CACCATGGCCCACGCGCCATTCATCGCCGCCGCCGGCCCGGAATTTTTCGGAGTGGACGATTTCTCGAAACTTCCGAACC
TGAAGGATCTGGCCTCGATCTACGAAATGCCCCAGTTCACCAAATGGAACAGCTTCCGCGAAAGCGACGACTCCCGCTTC
GTGGGTCTGACCGTCCCCCGATTCATGCTTCGTCTTCCCTACGGGCAAGGCACCGTTCCCTCCAAAAAATTCAACTACCA
GGAAGATGTCTCGGGCGGCAACAGCTCGTTTCTCTGGGGAAACGCCTCGTTCGCCTTCGCGTCGAGACTGTCGGAGAGCT
TTGCCAAATACCGCTGGAACACAAACATCATCGGACCTCAAGGTGGTGGCGCCGTGACCAATCTCCCGATCTACAACTTC
GAAGCGATGGGGGAGGTCCAGAGCAAGATTCCCACAGAAATCCTCGTCTCGGAGCGGCGGGAATTCGAACTGGCCGAACA
GGGCTTCATTGGATTGACCATGCGAAAGAACAGCGACAACGCCGCTTTCTTCTCGGCAAACTCCACCCAGAAAGCCAAAA
TCTTCGCCCAGACAAAAGAAGGCAAGGAGGCCGAGCTCAACTACAAGCTCGGGACCCAGCTTCCCTATATTTTTGTCGTG
AGCCGGCTCGCCCATTACATCAAGATCATCCAGCGGGAAAACATCGGAACATGGAAAGAGCGGGGCGATCTCGAAACGGA
GCTCAACAACTGGATCCGCCAGTACGTCTCCGACATGGACAACCCCGCGCCCGGCGTCCGGAGCCGGCGCCCCCTCAGGC
AGGCCGAAATTGTCGTGTCCGATGTTGACGGAGATCCGGGATGGTACCGGGTTTCCCTGAAGGTCAGGCCCCACTTCAAG
TATATGGGCGCCTCCTTCACCCTGTCTCTTGTCGGGAAGCTCGACAAGAAATAA

Protein sequence :
MAENAQDQKGQSQSSEQPTFSDSLIDDLVEATRLKPGDEAYSITRQGVKAFINELLEPQRAVEKVTQATVDEMIAELDKK
LCHQVDAILHNAEFQKMESAWRSLKFLVDRTDFRENNKIEILNVSKQKLLEDFEDAPEITKSGLYKIAYTNEFGQFGGQP
YGTIIANYEMNPGPQDIKLLQNIASVATMAHAPFIAAAGPEFFGVDDFSKLPNLKDLASIYEMPQFTKWNSFRESDDSRF
VGLTVPRFMLRLPYGQGTVPSKKFNYQEDVSGGNSSFLWGNASFAFASRLSESFAKYRWNTNIIGPQGGGAVTNLPIYNF
EAMGEVQSKIPTEILVSERREFELAEQGFIGLTMRKNSDNAAFFSANSTQKAKIFAQTKEGKEAELNYKLGTQLPYIFVV
SRLAHYIKIIQRENIGTWKERGDLETELNNWIRQYVSDMDNPAPGVRSRRPLRQAEIVVSDVDGDPGWYRVSLKVRPHFK
YMGASFTLSLVGKLDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-152 58
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 1e-152 58
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 6e-149 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LFE_2274 YP_005470076.1 hypothetical protein VFG2475 Protein 0.0 69
LFE_2274 YP_005470076.1 hypothetical protein VFG2093 Protein 8e-167 63