Gene Information

Name : LFE_2273 (LFE_2273)
Accession : YP_005470075.1
Strain : Leptospirillum ferrooxidans C2-3
Genome accession: NC_017094
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2335440 - 2335940 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGGATGATCAAGGTTCTGTCGCCCCCAAGGAAAGAGTCAATATCGTCTACCGTCCGGCGACGGGAGATGCGAAGGAAGA
AGTCGAACTGGCCTTCAAGCAGCTCGTGGTCGGAGACTTCACCCAGAAAGAAGACGACCGGCAGCTTGAAGAGATCAAGC
CCATCAATGTGGACAAGGACAACTTCGACAATGTCCTTGAAAGCCACAAGCTCTCTCTTGACCTGACCGTCCCCAACAGC
CTGGAAACCAGGAAGCCCGGAGAAGAGCCCGAAAACATGAGCGTCTCCCTGAAGTTCAAGAGCCTCAAGGATTTCGACCC
CGACTCCATCGTCGAGCAGGTTCCCGAACTTCGAGAGCTGATCGCACTGAGAGATGCCCTGAAAGCCCTGAAGGGACCAC
TGGGGAATATTCCCGATTTCCGGAAGAAACTTCAGGAGATCATCCAGAACGAAGGAACCCGGGAAAAATTCCTCTCCGAA
CTTGGCATCAAGAATTCCTGA

Protein sequence : 
MDDQGSVAPKERVNIVYRPATGDAKEEVELAFKQLVVGDFTQKEDDRQLEEIKPINVDKDNFDNVLESHKLSLDLTVPNS
LETRKPGEEPENMSVSLKFKSLKDFDPDSIVEQVPELRELIALRDALKALKGPLGNIPDFRKKLQEIIQNEGTREKFLSE
LGIKNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 1e-29 44
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-28 41
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LFE_2273 YP_005470075.1 hypothetical protein VFG2474 Protein 2e-45 57
LFE_2273 YP_005470075.1 hypothetical protein VFG2092 Protein 7e-39 53