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Name : LFE_1230 (LFE_1230) Accession : YP_005469045.1 Strain : Leptospirillum ferrooxidans C2-3 Genome accession: NC_017094 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATPase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1253405 - 1255846 bp Length : 2442 bp Strand : - Note : - DNA sequence : ATGATGGACAAATTTACAGAAAAAGGTCGCAAAGTTATCATTATGGCAAGGGAAGAGGCCGAAAAGCACCAGAATGATTA TCTTGGGACGGAACATATTGTCTTGGCTCTTGTGCGTGAACAGGACGGAATACCGGTCTCTGTCCTCAAAAGGATGGGGC TGACTCCCGAACAGATCCGCATGGAAATAGAGAGGAATCTTCTGGGTGGCACATCGACGCTCACCTTTGGAGAGCTTCCT CTTACACCCCGTGTCAAAAAAGTCATCGAATATGCTGTCGATGAAGCCCGTTTGCTGGGCCATACACATATTGGGAGCGA ACATCTTCTTCTGGGAGTCCTCCGGGAAGAGGATGGTATCGGTGGAAAAATCCTCAGGGCTTTGGGTGCCAATCTGATGG CGGCAAGACAGTTGACCGCCAGTCTTCTGAAACGGGCAAACTCTGGCTCCGCCAAGGAAAAAGAACGGAAAAGCAACACT CCGGCCCTTGATGACTTTGGCAGGGATCTCACACAAATGGCTGTCGAGAACCAGCTTGATCCCGTTATCGGAAGGACCGA GGAAATCGAACGCGTTCTCCAGATTCTGGGAAGAAGGGGCAAGAACAACCCGATCCTTATCGGAGAGTCCGGCGTGGGTA AAACAGCCATCGTTGAAGGGCTCGCCCAGAAAATCGTGGCGGGAGAGGTTCCCGACAATCTTCTGAACAAGAGGGTCATC GCGCTCGATCTGGGATCCCTTGTCGCCGGGACCAAGTATCGCGGCCAGTTCGAGGAACGTCTGAAGATTGTCATGAAGGA AGTGGTGACAGCCGGAAATATCATCATCTTCATTGATGAACTCCATACCTTGGTTGGAGCGGGAGCGGCCGAAGGCTCGA TCGATGCCTCCAACATGCTCAAACCGGCTCTCTCCAGAGGAGAAATCCAGTGTATTGGAGCCACCACACTTGATGAATAC AGAAAATACATTGAAAAAGACGGTGCCCTGAAGCGTCGCTTCCAGCCCATTCAGGTGAACGAACCCCCTGTTGAGGAAGC GGAGCGGATCATCATGGGTCTCAGGGATCGTTATGAAGAACATCACGGAGTCCAGATCACGGACGCCGCCATTCATGATG CGGTCACATTGGCCCAACGGTATGTGACAGACCGGTTCCTGCCGGACAAGGCGATTGATATCATTGATGAGGCGGGCTCC CGCGCCAAGCTCAAGAGCTTTTCCCTGCCGGAAGATCTCAAGGGACTTGATCAGGAGCTGAAAAGGGTCATCAGGGACAA GGAAAAAGCCATTCGAGTCCAGAACTTTGAGGAGGCGGTCAGACTTCGTTCGGAGGAGGATGTCCTCAAAAAGCAGTCCG AAGAGGAAAAGCTGCGCTGGAAAACCGAGCAGGAGAGAAACAAGCCTGTGATCGGCCCTGAAGAGATTTCCGTCATTGTT TCCAAGATGACCGGAATTCCCCTCTACAAAATAGAGGAACAGGAAAGCCAGAAGCTTTTGAAACTGGAATCCGAGATGCA TCAGAGAATCGTTGGTCAGGATGAAGCCATTTCCGCCATTGCACGCTCGATCAGACGCTCCCGTGCAGGGATCAAGGGAG AAAAGCGTCCGATCGGATCCTTTATTTTCCTGGGACCGACAGGTGTCGGAAAGACGGAGCTTGCGCGAACGCTCGCAGAG ACCCTTTTTGGAAATGAAGAGGCTCTTATCCGGGTCGACATGTCCGAGTACATGGAACGGTTCAATGTTTCCAGGCTGAC CGGAGCACCTCCCGGTTACGTCGGGTACGAAGAAGGCGGACAGCTGACAGAACGGGTCCGTCGCAGACCATATTCCGTTG TCCTGTTTGACGAAATTGAAAAGGCTCATCCAGACCTTTTCAATGTACTTTTGCAAATTCTTGACGATGGATACATTACG GACAGCCTTGGACGCAAAATCGACTTCAAGAATACTGTCCTGATCATGACATCCAATCTTGGTGCCCGTTCGATTGAAAA AGAGGGCAGCCTGGGATTTCAGCGAGCGGGGCTCGATTCCAAGGAGAAGTTCGTCAAGAACTCCATCCAGGAAGAACTCA AGAGAACCTTCAACCCTGAATTTCTCAACAGGATTGACGATATCGTTGTCTTCCATCCGTTGACGGAGATTCACCTTGAG GCGATCGTTGATCTCAGAATTGAAGACCTGAACAAGCGGCTTGTCGAGAAGGGGATCTCGGTAACACTTACTCCTGAAGC CAAAAAGTGGCTCGTCAAGGAAGGCTATGAGGCCCATTATGGTGCTCGGCCGATGAGAAGGGCGATACAACGACATATAG AAGACAGACTCTCCGAAATGATCATTTCCGGACAGTTCAAGGATCCGAAGAAAATCCGGGTGGAACTCCGGGAAGGTCAC CCCGTCTTTATTGAAGAAGACATGATGGCGCAAGTCGGCTGA Protein sequence : MMDKFTEKGRKVIIMAREEAEKHQNDYLGTEHIVLALVREQDGIPVSVLKRMGLTPEQIRMEIERNLLGGTSTLTFGELP LTPRVKKVIEYAVDEARLLGHTHIGSEHLLLGVLREEDGIGGKILRALGANLMAARQLTASLLKRANSGSAKEKERKSNT PALDDFGRDLTQMAVENQLDPVIGRTEEIERVLQILGRRGKNNPILIGESGVGKTAIVEGLAQKIVAGEVPDNLLNKRVI ALDLGSLVAGTKYRGQFEERLKIVMKEVVTAGNIIIFIDELHTLVGAGAAEGSIDASNMLKPALSRGEIQCIGATTLDEY RKYIEKDGALKRRFQPIQVNEPPVEEAERIIMGLRDRYEEHHGVQITDAAIHDAVTLAQRYVTDRFLPDKAIDIIDEAGS RAKLKSFSLPEDLKGLDQELKRVIRDKEKAIRVQNFEEAVRLRSEEDVLKKQSEEEKLRWKTEQERNKPVIGPEEISVIV SKMTGIPLYKIEEQESQKLLKLESEMHQRIVGQDEAISAIARSIRRSRAGIKGEKRPIGSFIFLGPTGVGKTELARTLAE TLFGNEEALIRVDMSEYMERFNVSRLTGAPPGYVGYEEGGQLTERVRRRPYSVVLFDEIEKAHPDLFNVLLQILDDGYIT DSLGRKIDFKNTVLIMTSNLGARSIEKEGSLGFQRAGLDSKEKFVKNSIQEELKRTFNPEFLNRIDDIVVFHPLTEIHLE AIVDLRIEDLNKRLVEKGISVTLTPEAKKWLVKEGYEAHYGARPMRRAIQRHIEDRLSEMIISGQFKDPKKIRVELREGH PVFIEEDMMAQVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LFE_1230 | YP_005469045.1 | ATP-dependent Clp protease, ATPase subunit | VFG0079 | Protein | 0.0 | 55 |
| LFE_1230 | YP_005469045.1 | ATP-dependent Clp protease, ATPase subunit | VFG0080 | Protein | 4e-145 | 50 |
