Gene Information

Name : AMIS_910 (AMIS_910)
Accession : YP_005459827.1
Strain : Actinoplanes missouriensis 431
Genome accession: NC_017093
Putative virulence/resistance : Virulence
Product : putative ATP-dependent Clp protease ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 102374 - 104962 bp
Length : 2589 bp
Strand : +
Note : -

DNA sequence :
ATGAACACCGAACGCTTGACCACCAAGAGCCGCGAAGTGATCACCACCGCGGTCGCCGACGCCGGCAGCCGCGGGCATGC
CACGGTCGAGCCGTGGCACATGCTGCTGTCGCTTCTCGACACCGGCGGGTCGACCGCGACCGCGCTGCTGCGAGCGGTCG
GGGCCAACCCCGCTGACGTGCGCCGGGCCGCCGCCCGAGCACTGGAGCAACTGCCGTCCGCCCGCGGCGCGAGCACCGCG
GAGCCCAGCCTCTCCCGCGAGTTCGTGAACGCGATCGGGTCCGCCGACCTGATCGCCAAGCCGCTCGGCGACGAGTATGT
GTCGACCGAGCACCTGCTGGCCGGCCTGGCCCGGGTCGGCGGCGCGGTCGGCCAGGCCCTGCAGAGCGCCGGCGCCACCG
AGGAAGCGCTGGTCGCGGCGTTCCCCCAGGTGCGCGGCGGCGAGCGGCGGGTGACCACGGCCGACCCCGAGCAGACCTAC
AAGTCCCTGGAGAAATACAGCGTGGACCTCACCGCGCTGGCTCGGGACGGCAAGATCGACCCGGTCATCGGCCGGGACGC
GGAGATCCGCCGGGTGGTGCAGGTGCTCTCCCGGCGTACCAAGAACAACCCGGTGCTGATCGGTGAGCCGGGCGTCGGCA
AGACCGCGATCGTCGAGGGCCTGGCCCAGCGGATCGTCGCCGGCGACGTGCCGGAGACGCTGCGCGACAAGAAACTGGTC
TCGCTCGACCTCGGCGCGATGGTCGCCGGCGCGCAGTACCGCGGCCAGTTCGAGGAGCGGCTGAAGAGCGTCCTGGAGGA
GATCCGCGGCTCGAACGGGCAGGTCGTCACGTTCCTCGACGAGCTGCACACGGTCGTCGGTGCCGGCAAGGGCGAGGGCT
CGATGGACGCCGGCAACATGCTCAAGCCGATGCTGGCCCGGGGCGAGCTGCGGATGGTCGGCGCGACCACGCTCGACGAG
TACCGCGAGCACATCGAGAAAGACCCGGCCCTGGAACGCCGCTTCCAGCCGGTCGTCGTCGGCGAGCCGACCGTGGAGGA
CACCATCGGCATCCTGCGCGGCCTCAAGGGACGTTACGAGGCGCACCACCGGGTGCAGATCACCGACGCCGCGCTGGTCG
CGGCGGCCAGCCTCTCCGACCGTTACATCAGCGACCGGTTCCTGCCGGACAAGGCGATCGACCTGATCGACGAGGCCGCG
TCCCGGCTCCGCATGGAGATCGACTCCCGGCCGGTCGAGCTGGACCAGCTGCAGCGGCAGGTCGACCGGATGCGGGTGGA
GAAACTGGCGCTCAGCAAGGAGACCGACCCCGCGTCGGTGGCCCGGCTGGAGCGGCTGGACCGGGACCTCGCCGACCGCG
AGGAGGACCTCACCGCGCTCACCGCCCGGTGGGAGCGCGAGCGCGGCGGGCTGAACCGGGTGGGTGAGCTGAAGAAGCAG
CTCGACGAGGCGCGGGCCGCCCAGGAGCGGGCCCAGCGCGACGGCGACCTGCTGGAGGCCTCCCGGCTGCTCTACGAGGT
GGTCCCCACCCTGGAGAAGGAGATCCAGGCGGCGTCCGACGCCGAGGACGAGCGGGACGAGCCGCCGATGGTCAAGGAGG
AGGTCGGGGCCGACGACATCGCCGAGGTCGTCTCCGCGTGGACCGGCATCCCGGCCGGCCGGATGATGGAGGGCGAGACC
GCCAAGCTCCTGCGCATGGAGGAGTCGCTGCAAGGCAAGGTGATCGGCCAGCGGGAGGCGGTGGCCGCGGTCGCGAGCGC
GGTCCGCCGCGCCCGGGCCGGCATCGCCGACCCGGACCGGCCCACCGGCAGCTTCCTCTTCCTCGGCCCCACCGGCGTCG
GCAAGACCGAGCTGGTGAAAGCGCTGGCCGGTTTCCTCTTCGACGACGAGCGGGCGATGGTCCGCATCGACATGAGTGAG
TATGGGGAGAAGCACTCGGTGGCCCGGCTGGTCGGTGCGCCGCCCGGATACGTGGGGTACGAGGAGGGCGGCCAGCTGAC
CGAGGCGGTGCGGCGCCGGCCGTACAGCGTGGTGCTCCTGGACGAGGTGGAGAAAGCCCACCCGGACGTGTTCGACCTGC
TGTTGCAGGTGCTCGACGACGGGCGGCTCACCGACGGCCAGGGCCGGACCGTCGACTTCCGCAACGCGATCCTGGTGCTC
ACCTCGAACCTCGGCTCGGCGAACGCCGACTTCACGATGGGCGACGAGGAGCGCCGCGACGAGGTTCTCGCGGCGGTCCG
GGCGCACTTCAAGCCGGAGTTCCTGAACCGGCTCGACGACATCGTGGTCTTCCACGCGCTCACCAAGGCGGACCTGACCG
CGATCGTCGACATCCAGCTCGGCCGGCTACGCGACCGGCTCGCCGAGCGCCGGCTCAGGCTCGAGGTGATGCCCGAGGCG
GTGGAGTGGCTCGGCGAGCACGGGTACGACCCGATCTACGGCGCCCGCCCGCTGCGCCGCCTGGTCCAGTCGACGATCGG
CGACCTGCTCGCCAAGGCGCTGCTGAGCGGCGAGATCCGGGACGGCGACGTGGTGCTGGTCTCGCTCAGCGAGGGCAAGG
ACGGCCTGGCCGTCCGGCGCGGCGTCTGA

Protein sequence :
MNTERLTTKSREVITTAVADAGSRGHATVEPWHMLLSLLDTGGSTATALLRAVGANPADVRRAAARALEQLPSARGASTA
EPSLSREFVNAIGSADLIAKPLGDEYVSTEHLLAGLARVGGAVGQALQSAGATEEALVAAFPQVRGGERRVTTADPEQTY
KSLEKYSVDLTALARDGKIDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPETLRDKKLV
SLDLGAMVAGAQYRGQFEERLKSVLEEIRGSNGQVVTFLDELHTVVGAGKGEGSMDAGNMLKPMLARGELRMVGATTLDE
YREHIEKDPALERRFQPVVVGEPTVEDTIGILRGLKGRYEAHHRVQITDAALVAAASLSDRYISDRFLPDKAIDLIDEAA
SRLRMEIDSRPVELDQLQRQVDRMRVEKLALSKETDPASVARLERLDRDLADREEDLTALTARWERERGGLNRVGELKKQ
LDEARAAQERAQRDGDLLEASRLLYEVVPTLEKEIQAASDAEDERDEPPMVKEEVGADDIAEVVSAWTGIPAGRMMEGET
AKLLRMEESLQGKVIGQREAVAAVASAVRRARAGIADPDRPTGSFLFLGPTGVGKTELVKALAGFLFDDERAMVRIDMSE
YGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPDVFDLLLQVLDDGRLTDGQGRTVDFRNAILVL
TSNLGSANADFTMGDEERRDEVLAAVRAHFKPEFLNRLDDIVVFHALTKADLTAIVDIQLGRLRDRLAERRLRLEVMPEA
VEWLGEHGYDPIYGARPLRRLVQSTIGDLLAKALLSGEIRDGDVVLVSLSEGKDGLAVRRGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-92 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_910 YP_005459827.1 putative ATP-dependent Clp protease ATP-binding subunit VFG2084 Protein 8e-99 43