Gene Information

Name : fliP (AMIS_76380)
Accession : YP_005467374.1
Strain : Actinoplanes missouriensis 431
Genome accession: NC_017093
Putative virulence/resistance : Virulence
Product : putative flagellar biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8257846 - 8258715 bp
Length : 870 bp
Strand : -
Note : -

DNA sequence :
ATGATGCGACGCGCGATCCTGCTCCTGATGGCAGCGGCGGGGCTGGCCCTGGTGCTCCTGCCGGGAGCGGTGTCCGCCAT
GCCGAGCCAGGCTCCGGTCGCGCAGGCCCCGGTCGCGCAGGCCCCGGTCGCCCAGGCCCCGATCGCGCAAGCGCCGATCA
TGCACGGCCCGGTCGCGCGGGCGCCGGCTCCGCCGTCCCCACCCTCGATCAACCTCAACATCAACGGTACGAACCCCGAC
GGGTCCCGCCCGGCCTCGTCCCTGGTGATCGTCCTCGGTCTGACCGCGCTCTCGGTGGCGCCCGCGCTGCTGCTGCTCTG
CACGTCGTTCACCAAGGTCTTCATGGTCCTCGGCATCACCCGCAACGCGCTCGGCCTGACCACCATGCCGCCCAACCAGG
TGCTCGCCGGGCTGGCGCTGTTCCTGAGCCTGTTCATCATGGGACCGACCGTCTCGTCGATCAACGAGGTCGGTGTGCAG
CCCTACCTGGCCGGTGACAAGACCCAGTCACAGGCGTTCCAGGACGGTGTGGAGCCGCTGCGCGACTTCATGTCCGAGGT
GACCCGCGAGGACGAGGTCGCGCTGCTGGTCAAGGTCTCCGGCGCGGAGCAGCCGGCGAACATGGACGACGTCCCGCTGA
CCACGCTGATCCCGGCCTTCGTCCTCTCCGAGCTGCGGGCCGCGTTCATCATCGGGTTCGTCATCTTCATCCCGTTCCTG
ATCATCGACCTCGTGGTGTCGGCGTCACTGATGTCGCTGGGCATGATGATGCTGCCTCCGGTGACCGTGGCGCTGCCGTT
CAAGCTGTTGCTGTTCGTGCTGGTCGACGGCTGGGGCCTGATCATCACGGCGCTGGTGGGCTCGTACTGA

Protein sequence :
MMRRAILLLMAAAGLALVLLPGAVSAMPSQAPVAQAPVAQAPVAQAPIAQAPIMHGPVARAPAPPSPPSINLNINGTNPD
GSRPASSLVIVLGLTALSVAPALLLLCTSFTKVFMVLGITRNALGLTTMPPNQVLAGLALFLSLFIMGPTVSSINEVGVQ
PYLAGDKTQSQAFQDGVEPLRDFMSEVTREDEVALLVKVSGAEQPANMDDVPLTTLIPAFVLSELRAAFIIGFVIFIPFL
IIDLVVSASLMSLGMMMLPPVTVALPFKLLLFVLVDGWGLIITALVGSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 2e-20 44
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 2e-20 44
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-24 42
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 5e-27 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 2e-23 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-23 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-23 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 4e-23 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 4e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_005467374.1 putative flagellar biosynthesis protein VFG1259 Protein 3e-43 52
fliP YP_005467374.1 putative flagellar biosynthesis protein VFG2338 Protein 2e-36 50
fliP YP_005467374.1 putative flagellar biosynthesis protein VFG2494 Protein 5e-40 50
fliP YP_005467374.1 putative flagellar biosynthesis protein VFG2016 Protein 2e-39 47
fliP YP_005467374.1 putative flagellar biosynthesis protein VFG0044 Protein 6e-24 41