Gene Information

Name : AMIS_68380 (AMIS_68380)
Accession : YP_005466574.1
Strain : Actinoplanes missouriensis 431
Genome accession: NC_017093
Putative virulence/resistance : Virulence
Product : putative two-component system response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7409458 - 7410132 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCGTGCTGGTGGTGGAAGACGAGCGGAACCTGGCGGATGCGATCGCCCGCGGGCTGCGCCGCAAGGGGATGGCGGT
CGACGTCGCGTACGACGGCTTGCAGGGCCACGAGATGGCCTACGTGACCCGGTACGACGTGGTGGTGCTGGACCGGGACC
TGCCGGGCATGCACGGCGATGAGATCTGCGCCGAGCTGGTCGCGTCCGGCGCCCTGACCCGGGTGTTGATGCTCACCGCC
AGCGGGACCGTCGCCGACCGGGTCGAGGGCCTGGAGCTGGGCGCCGACGACTACCTCGCCAAGCCGTTCGCGTTCGAGGA
GCTGGTGGCCCGGGTGCAGGCGCTGGGCCGGCGGGCCACCCCGGCCGCGCCGCCGGTGCTCACCGTCGGCAACCTGGTGC
TCGACCAGACCCGCCGGGTGGTGACCCGTGGCGGCGTGCCGATCGAGCTGACCAACAAGGAGTTCGGCGTCCTGGAGGAG
CTGGTCAAGGCGCGCGGTGGGGTGGTGTCCACCGAGGAGCTGCTGGAGCGGGTCTGGGACGCCAACACCGACCCGTTCAC
CACGACCGTCCGGGTCACGATCAACACGCTGCGTAAGAAGATCGGCGATCCGCCGCTGATCGAGACGGTGGTCGGCGCGG
GTTACCGCGTGCCCGAGCCGGTCGTGGCCTCGTGA

Protein sequence : 
MRVLVVEDERNLADAIARGLRRKGMAVDVAYDGLQGHEMAYVTRYDVVVLDRDLPGMHGDEICAELVASGALTRVLMLTA
SGTVADRVEGLELGADDYLAKPFAFEELVARVQALGRRATPAAPPVLTVGNLVLDQTRRVVTRGGVPIELTNKEFGVLEE
LVKARGGVVSTEELLERVWDANTDPFTTTVRVTINTLRKKIGDPPLIETVVGAGYRVPEPVVAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_68380 YP_005466574.1 putative two-component system response regulator Y16952.3.orf35.gene. Protein 1e-45 54
AMIS_68380 YP_005466574.1 putative two-component system response regulator U82965.2.orf14.gene. Protein 3e-50 52
AMIS_68380 YP_005466574.1 putative two-component system response regulator BAC0125 Protein 4e-34 47
AMIS_68380 YP_005466574.1 putative two-component system response regulator BAC0083 Protein 3e-32 44
AMIS_68380 YP_005466574.1 putative two-component system response regulator BAC0308 Protein 1e-32 44
AMIS_68380 YP_005466574.1 putative two-component system response regulator BAC0197 Protein 1e-30 44
AMIS_68380 YP_005466574.1 putative two-component system response regulator BAC0638 Protein 1e-26 43
AMIS_68380 YP_005466574.1 putative two-component system response regulator BAC0111 Protein 1e-37 42
AMIS_68380 YP_005466574.1 putative two-component system response regulator BAC0347 Protein 3e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_68380 YP_005466574.1 putative two-component system response regulator VFG0596 Protein 2e-30 42