Gene Information

Name : AMIS_54020 (AMIS_54020)
Accession : YP_005465138.1
Strain : Actinoplanes missouriensis 431
Genome accession: NC_017093
Putative virulence/resistance : Virulence
Product : putative ATPase associated with various cellular activities
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5740380 - 5742983 bp
Length : 2604 bp
Strand : -
Note : -

DNA sequence :
ATGAGCATCGGACCGTTCGGACCAGCTGGGTCCGGTAGTTGGGACGACCTGTTCGCACGCTTCTTCGGCGCCACCGGAGG
CGCCGCCGGCCCGCAGCGGCCGTCGCAGCGTTTCGACATCGCGCGATACATGAGCAACGACGCCCGGCAGGTTCTCGCGG
ACGCCGCCCGGCGGGCCGCCGAGCTTTCCGGCGGGGGCAACGCGCTGGCCGACCTGGACACCGATCACCTGCTCTGGGCC
GTGCTCCAGCAGGAGCCGATGAAGCAGACCGTGCGCCGCGCCGGCACCGACCCGGTCGCGCTCCTCGCCGAACTCGACGC
GCAGGCCGACAACGAGGTCGCGCGCACCGCCGCCGCGAACCGTCTCGCCGACATGGGCGCGGCCGCCCGTGAACTCCCCG
AGCAGGTCGCGCTGACCCCGGCCGCCAAGCGCGCGCTGCTGGACAGCCTGCAGATCTCCCGGGCCGTCGGCGCCTCCTAC
ATCGGGCCGGAGCACATCCTGATGGCGCTCGGCCTGAACACCGACTCCGCGGCGGGACGGCTGCTCGCCGGCCGGCTCGA
CCCGCGCAACATGCCGCACCCGGAGGCCGCCTCGGGCACCGGCGGCGGCTCTCACCAGCCGCACCCGAGCAACCCGAACA
CCCCGACGCTGGAGCAGTTCGGCGTGGACCTCACCGAGTCCGCCCGCCGTGGCGAGATCGACCCGGTGGTCGGGCGCGCC
GACGAGATCGAGCAGGCCGTGGAGATCCTCTCCCGCCGTACCAAGAACAACCCGGTCCTGATCGGTGAGGCCGGCGTCGG
CAAGACCGCGATCGTCGAGGGCCTGGCCCAGCGGATCGTGGACGGCGACGTCCCGCTCACCCTGCAGGACAAGCGGGTCA
TCCAGCTCGACCTGGCCGGCCTGGTCGCGGGTACGCGTTACCGGGGCGACTTCGAGGAGCGCCTGCGCAAGGTGATCGAG
GAGATCCAGTCGTCCGGTGACGGTCTGATCGTCTTCCTCGACGAGATCCACACCCTGGTCGGCGCCGGTGGTGGCGGCGG
GGAGGGTGGCGGCATGGACGCGAGCAACATGCTCAAGCCGGCGCTCGCCCGCGGCAAGCTGCGCGTGATCGGCGCGACCA
CCCTCGACGAGTACCGCAAGAACATCGAGAAGGACGCCGCCCTGGCGCGCCGGTTCCAGCCGGTCCTGGTCGGCGAGCCG
TCGGTCGAGGACACCGTGGCGATCCTGCGCGGGCTGCGGGACAACTACGAGGCCCACCACCAGGTACGGATCACCGACGA
GGCGCTCGACGCGGCGGCGGTGCTGTCCGACCGCTACATCACCGACCGGTTCCTGCCGGACAAGGCGATCGACCTGATCG
ACCAGGCCGGCGCGCGGGTCCGCCTGCGCGTGAAGACGCCGGACGCCGGCCTGCGCGAGCGGGAGCGCCGCCTCGAGGAG
CTGTCCCGGGACCGGGACCAGGCGGTCGCTGCCGAGAAGTACGAGAAGGCGTCCGAACTGCGCGACGAGATCAACCAGCT
CAAGGAGCAGATCGCCAGCGCCGGCGTCGGCGCGGACGGCATCCCGCAGGTGACCCAGGACGACATCGCCGAGGTGGTGT
CGCGCTCCACCGGCGTGCCCGTCGCGCAGCTGACCGAGGCCGAGCGGGACCGCCTGCTCCGGCTGGAGCAGCACCTGCAC
GAGCACGTCATCGGCCAGGAGGACGCGGTCGAGGCGGTCGCCGAGGCGGTCCGCCGCTCGCGGGCCGGATTGGGTGACGA
GGATCGGCCGGTCGGCAGCTTCCTCTTCCTCGGCCCGACCGGTGTCGGCAAGACCGAGCTGGCACGGTCGCTCGCCGAGG
CGCTGTTCGGCGAGCCGGACCGGATGATCCGGCTGGACATGAGCGAGTTCCAGGAGCGGCACACCGTGTCGCGGCTGGTC
GGCGCCCCTCCCGGCTACGTCGGCTACGACGAGGCGGGACAGCTGACCGAGGCGGTGCGGCGGCGTCCGTACAGCGTGGT
GCTGCTCGACGAGATCGAGAAGGCCCACCCGGACGTCTTCAACATCCTGCTCCAGGTGCTCGACGACGGCCGTCTCACCG
ACAGCCAGGGCCGGACGGTCAGCTTCAAGAACACCGTCCTGATCATGACGTCGAACCTGGGTTCGGATCTGATCACCGGC
TCGACCCGCAGTGTCGGCTTCGGCGCGGCGGCGGGTGGCCGGTCGGCCGACGACGAGCTGCGTGACCGCCTCGACCGCCG
GCTCAAGGAGTCGCTGCGGCCGGAGTTCATCAACCGGATCGACGAGATCATCATCTTCCGCCAGCTGGAGACGGATCAGC
TCCACAAGATCACGTCGATGCTGCTGGAGGAGACGCGGCGCCGCCTGCACGCGCAGGACGTCGAGATGGAGATCACCGAC
GCGGCCGTGGACTGGCTCGCCGACCGTGGTTTCCAGCCGGAGTTCGGCGCGCGGCCGCTGCGCCGGACCATCCAGCGGGA
GCTCGACAACCGTCTGTCGAAGATGCTCCTCGCCGCCGACCTGGCGCCGGGCCGCAAGGTCCACGTCGACGTCGCCGACG
ACAAGCTGACCTTCGAGGTGCAGTCCTCGGTGGCGGCTCGCTGA

Protein sequence :
MSIGPFGPAGSGSWDDLFARFFGATGGAAGPQRPSQRFDIARYMSNDARQVLADAARRAAELSGGGNALADLDTDHLLWA
VLQQEPMKQTVRRAGTDPVALLAELDAQADNEVARTAAANRLADMGAAARELPEQVALTPAAKRALLDSLQISRAVGASY
IGPEHILMALGLNTDSAAGRLLAGRLDPRNMPHPEAASGTGGGSHQPHPSNPNTPTLEQFGVDLTESARRGEIDPVVGRA
DEIEQAVEILSRRTKNNPVLIGEAGVGKTAIVEGLAQRIVDGDVPLTLQDKRVIQLDLAGLVAGTRYRGDFEERLRKVIE
EIQSSGDGLIVFLDEIHTLVGAGGGGGEGGGMDASNMLKPALARGKLRVIGATTLDEYRKNIEKDAALARRFQPVLVGEP
SVEDTVAILRGLRDNYEAHHQVRITDEALDAAAVLSDRYITDRFLPDKAIDLIDQAGARVRLRVKTPDAGLRERERRLEE
LSRDRDQAVAAEKYEKASELRDEINQLKEQIASAGVGADGIPQVTQDDIAEVVSRSTGVPVAQLTEAERDRLLRLEQHLH
EHVIGQEDAVEAVAEAVRRSRAGLGDEDRPVGSFLFLGPTGVGKTELARSLAEALFGEPDRMIRLDMSEFQERHTVSRLV
GAPPGYVGYDEAGQLTEAVRRRPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVSFKNTVLIMTSNLGSDLITG
STRSVGFGAAAGGRSADDELRDRLDRRLKESLRPEFINRIDEIIIFRQLETDQLHKITSMLLEETRRRLHAQDVEMEITD
AAVDWLADRGFQPEFGARPLRRTIQRELDNRLSKMLLAADLAPGRKVHVDVADDKLTFEVQSSVAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 6e-158 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_54020 YP_005465138.1 putative ATPase associated with various cellular activities VFG0079 Protein 2e-168 53
AMIS_54020 YP_005465138.1 putative ATPase associated with various cellular activities VFG0080 Protein 8e-143 51