Gene Information

Name : AMIS_52880 (AMIS_52880)
Accession : YP_005465024.1
Strain : Actinoplanes missouriensis 431
Genome accession: NC_017093
Putative virulence/resistance : Virulence
Product : putative FecCD-family membrane transport protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5616970 - 5618010 bp
Length : 1041 bp
Strand : -
Note : -

DNA sequence : 
GTGAGTTCGCTGCTTCTTCCCGGCCGGCGCGTGCTCCGGGCCGGGCCGGTCTCGGCGTCGGTGCCGATCCGGACCGTCGC
CGTCACGCTGCTGGCGCTGGTCGCCACCGTCGCGGCCGGGGTCGCCGCGGTCGGGCACGGCGACTTCCCGATCAGCCCGG
AGACCGTCTGGCAGGTCGCCACCGGCGGCGGCACCCGCATCGAACGGCACATCCTGCTCAACCTGCGACTGCCGCGGGTG
CTCTGCGGCCTGCTCGCCGGCGCCGCCCTCGCGGTCGCCGGAGCGCTCACCCAGACGTTCGCCCGCAACCCCCTGGCCAG
CCCGGACGTCCTCGGCGTCACGTTCGGCGCGTCCGCCGGGGCGGTCACCGCGATCGTGCTCGGCATCGGTGCCGTCCCGT
TCGCCGCGCTCGGCGGGGCGCTGCTCAGCGCGGCCGGCATCTACCTGCTCGCCTGGAAGCAGGGCATCGACGGCTATCGC
CTGGTGCTGATCGGGCTCGGCGCCGGACAGCTGCTCGCCGCGGTCACCTCCTGGCTGCTGCTCCGCGCCGACCAGACCGA
CCTGACCCGGGCGAGCATCTGGCTGACCGGCTCGCTCGCCGGTCGTGACTGGTCACAGGTCCGGCCGCTCGCCCTTGCCC
TGCTCGTGCTGCTGCCGGCGGCGCTCGCCACCGGCCTGGCGCTGCGGGTGCTGCAGTTCGGCGACGACACGGCGCGGGGA
TTGGGATTACGGCTGCCGAGCGCCCAGCTCGCCGTGGTGGTGGTCGCGGCCGCGCTAGCCGCCGCGGCGGTGGCGGCCGC
CGGGCCGATCGAGTTCGTCGCGTTCGTGGTGCCGCAGATAGCGTTGCGGCTCTGCGGCGGGAGCCGGCCGCCGCTCGTCG
CGTCGGCGGTGCTCGGTGCGCTGCTCGTGGTGGGGTGCGACCTGCTGGCGCGGATCGTGGTGGCGCCGGCGGAGTTGCCG
GTCGGGCTGGTCACGGCGATCGTGGGGACGCCGTACTTGTTGTGGTTGTTGGTGCGAGGCTCGCGGAGGATCAGCGCGTG
A

Protein sequence : 
MSSLLLPGRRVLRAGPVSASVPIRTVAVTLLALVATVAAGVAAVGHGDFPISPETVWQVATGGGTRIERHILLNLRLPRV
LCGLLAGAALAVAGALTQTFARNPLASPDVLGVTFGASAGAVTAIVLGIGAVPFAALGGALLSAAGIYLLAWKQGIDGYR
LVLIGLGAGQLLAAVTSWLLLRADQTDLTRASIWLTGSLAGRDWSQVRPLALALLVLLPAALATGLALRVLQFGDDTARG
LGLRLPSAQLAVVVVAAALAAAAVAAAGPIEFVAFVVPQIALRLCGGSRPPLVASAVLGALLVVGCDLLARIVVAPAELP
VGLVTAIVGTPYLLWLLVRGSRRISA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusC YP_005143744.1 iron ABC transporter permease Virulence Not named Protein 7e-19 44
fecD AAL08452.1 FecD Virulence SRL Protein 6e-10 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_52880 YP_005465024.1 putative FecCD-family membrane transport protein BAC0163 Protein 7e-10 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_52880 YP_005465024.1 putative FecCD-family membrane transport protein VFG1043 Protein 4e-10 42
AMIS_52880 YP_005465024.1 putative FecCD-family membrane transport protein VFG0928 Protein 6e-16 41