Gene Information

Name : AMIS_52870 (AMIS_52870)
Accession : YP_005465023.1
Strain : Actinoplanes missouriensis 431
Genome accession: NC_017093
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5616185 - 5616973 bp
Length : 789 bp
Strand : -
Note : -

DNA sequence :

GTGAACGGGAGGCTTCGCGGGGCGAACCTCGACCTGTCATACGGCGATGTCCAAGTCACGAAAAATCTGGACATACCCGT
GGCGGATGGTCGGATCTCGGTGATCATCGGGCCGAACGGCTGCGGGAAGTCGACGGTGCTGCGCGCCCTCGGCCGCCTGC
TGCGACCCGGCGGGGGAGAGGTCCTCCTCGACGGCCGCCGCATCGACCGGACGCCCACCCGCGACGTGGCCCGCGTCCTC
GGCGTCCTGCCGCAGTCCCCGGCCGCCCCCGACGGACTCACCGTCGCCGACCTGGTGATGCGCGGCCGCCATCCGCACCA
GTCGTGGTTCCGCCAGTGGTCCGGCGACGACGAGAGCCTGGTAGCCGACGCGCTGCGCTGGACCGGCATGCTGGAGTACG
CCTCCCGCCCGGTCGACGCCCTCTCCGGCGGCCAGCGCCAGCGCGCCTGGATCAGCATGGCGCTCGCCCAGGGCACCGAC
CTGCTGCTGCTCGACGAGCCGACCACGTTCCTCGACCTCGCCCACCAGATCGACGTCCTCGACCTGATCCGCCGCCTGCA
CCGGGAGAAGGGGCGCACGGTCGTGATGGTCCTGCATGATCTGTCACTGGCCGCCCGATATGCCGACGTCCTGATAGCGA
TGAAGGACGGCCGGATCGTCGCCTCGGGCGCGCCGGAGGAGGTGCTGACCCCCGAACTGCTGGACGAGGTCTTCGGCCTC
CACGCGATGGTCGTCCCCGATCCGGCCACGGGCACTCCACTGGTGGTCCCCATCCCCCGGACCACCTGA

Protein sequence :

MNGRLRGANLDLSYGDVQVTKNLDIPVADGRISVIIGPNGCGKSTVLRALGRLLRPGGGEVLLDGRRIDRTPTRDVARVL
GVLPQSPAAPDGLTVADLVMRGRHPHQSWFRQWSGDDESLVADALRWTGMLEYASRPVDALSGGQRQRAWISMALAQGTD
LLLLDEPTTFLDLAHQIDVLDLIRRLHREKGRTVVMVLHDLSLAARYADVLIAMKDGRIVASGAPEEVLTPELLDEVFGL
HAMVVPDPATGTPLVVPIPRTT

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
iusE	YP_005143742.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	2e-61	53
fecE	AAL08451.1	ATP-binding protein FecE	Virulence	SRL	Protein	4e-45	46
SPN23F_09560	YP_002510939.1	ferric siderophore ABC transporter ATP-binding protein	Virulence	PPI-1	Protein	3e-52	45
SP_1035	NP_345510.1	iron-compound ABC transporter ATP-binding protein	Not tested	PPI-1	Protein	3e-52	45
fagC	YP_005680307.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	4e-52	45
fagC	YP_003782430.1	ABC transporter ATP-binding protein	Not tested	PiCp 1	Protein	4e-52	45
fagC	YP_005682397.1	ATP binding cytoplasmic membrane protein	Virulence	PiCp 1	Protein	4e-52	45
fagC	YP_005684488.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	4e-52	45
DIP0585	NP_938961.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	3e-45	44
ciuD	YP_003783391.1	iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	2e-48	43
ciuD	YP_005685432.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	2e-48	43
ciuD	YP_005681255.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	2e-48	43
ciuD	YP_005683346.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	2e-48	43

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
AMIS_52870	YP_005465023.1	putative ABC transporter ATP-binding protein	BAC0164	Protein	2e-45	46

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
AMIS_52870	YP_005465023.1	putative ABC transporter ATP-binding protein	VFG0925	Protein	4e-62	54
AMIS_52870	YP_005465023.1	putative ABC transporter ATP-binding protein	VFG1042	Protein	2e-45	46