Gene Information

Name : AMIS_52490 (AMIS_52490)
Accession : YP_005464985.1
Strain : Actinoplanes missouriensis 431
Genome accession: NC_017093
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5576412 - 5577161 bp
Length : 750 bp
Strand : -
Note : -

DNA sequence : 
ATGCAGATGAAGGTGGTAGGACACACGGCGGTCGCGGCCGTGGACCTGGTCAAGGTGTACGGCGAGGGCGACACGGCGGT
GCGCGCGCTGGACGGGGTCACGGTGGGTTTCGACAGGGGCCGCTTCACCGCGATCATGGGCCCGTCCGGGTCCGGCAAGT
CGACGCTCATGCACTGCCTGGCAGGGCTGGACACCGCCTCCTCCGGGCAGGTGCTGCTCGGTGAGACCGACCTGACCCGC
CAGCCGGACCGGGTGCTGACCCGCGCCCGCCGGGAGCGGATCGGCTTCGTGTTCCAGTCGTTCAACCTGTTGCCGCAGCT
CACCGCCGCCGCGAACATCACGCTGCCGCTGGACCTGGCCGGGCGGACTCCCGACCCGCAGCTGTTCGACCGCCTGGTGA
CCTCGCTCGGCCTGGCCGGCCGGCTCACCCACCGGCCCAGCGAGCTCTCCGGCGGCCAGCAGCAGCGGGTCGCGCTGGCC
CGCGCGCTGGTGTCGCGTCCGGAGGTGCTCTTCGCCGACGAGCCGACCGGCAACCTGGACTCCCGCTCCGGCGCCGAGGT
GCTGCACCTGCTGCGTGACTCGGTGCGGGATCTGGGCCAGACCATCGTGATGGTCACCCACGATCCGGGCGCGGCGGCGT
ACGCGGACCGGGTCGTGCTGCTCGCCGACGGCCGGCTGGCGGGCGAGATCGACCGCCCGGACATCGCCTCGGTCACCGAC
GCGCTGCAGAACCTGGCGGCCGCCCGATGA

Protein sequence : 
MQMKVVGHTAVAAVDLVKVYGEGDTAVRALDGVTVGFDRGRFTAIMGPSGSGKSTLMHCLAGLDTASSGQVLLGETDLTR
QPDRVLTRARRERIGFVFQSFNLLPQLTAAANITLPLDLAGRTPDPQLFDRLVTSLGLAGRLTHRPSELSGGQQQRVALA
RALVSRPEVLFADEPTGNLDSRSGAEVLHLLRDSVRDLGQTIVMVTHDPGAAAYADRVVLLADGRLAGEIDRPDIASVTD
ALQNLAAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-42 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-42 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-42 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_52490 YP_005464985.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-43 47
AMIS_52490 YP_005464985.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-48 45
AMIS_52490 YP_005464985.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-37 45
AMIS_52490 YP_005464985.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-42 44