Gene Information

Name : AMIS_49940 (AMIS_49940)
Accession : YP_005464730.1
Strain : Actinoplanes missouriensis 431
Genome accession: NC_017093
Putative virulence/resistance : Virulence
Product : putative two-component system response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5292238 - 5292978 bp
Length : 741 bp
Strand : -
Note : -

DNA sequence : 
GTGGGGGTGCGGTTGCTGGTGGTGGAGGACGAGGCCCGGCTTGCTGCCGCGCTGCGGCGGGGCCTGCAGGCCGAGGGATT
CGCGGTCGACGTGGCCGCCGACGGGCAGGACGGCCTGGAGATGGCCCGCCACGGCGGGTACGACGCGATGATCCTCGACG
TGATGCTGCCCCGCCTCTCCGGGTACCGGGTGGTGCGGCAGCTGCGCGCCGAGCGGCACTGGCTGCCGGTGCTCATGCTG
TCGGCGAAGGACGGCGAGTACGACCAGGCCGACGGCCTCGACTGCGGCGCCGACGACTACCTGACGAAGCCCTTCTCGTA
CGTCGTCCTGCTCGCCCGCCTGCGAGCCCTGCTGCGCCGCGGCGCGCAGGCCCGCCCGGTGGTCCTCGCCTTCGGCGACG
TGGAGCTGGACCCGGCCGAGCGCCGCGTGCTGGTGGCCGGCGCCGAGGTGACCCTGACCGCCCGCGAGTTCGCGCTCCTG
GAGTACCTGATGCGCCGCCCCGGCCAGGTGGTCTCCAAGACCGAGCTGCTCGACCACGTCTGGGACGCCGCGCTGGACAC
CGCGCCGAACGCGGTCGAGGTCTACGTCGGCTACCTGCGCCGCAAGATCGGCCGGGACCGCCTGGAGACGGTCCGCGGTG
CCGGATACCGCCTGGCCCAGGCCGGCGCCGACGCACCAGCCGGTTCCGGCGCCCCGGTCGGTTCCCCCGCGCCCGCCGGA
TTCGATGCGCCGGCCGAATGA

Protein sequence : 
MGVRLLVVEDEARLAAALRRGLQAEGFAVDVAADGQDGLEMARHGGYDAMILDVMLPRLSGYRVVRQLRAERHWLPVLML
SAKDGEYDQADGLDCGADDYLTKPFSYVVLLARLRALLRRGAQARPVVLAFGDVELDPAERRVLVAGAEVTLTAREFALL
EYLMRRPGQVVSKTELLDHVWDAALDTAPNAVEVYVGYLRRKIGRDRLETVRGAGYRLAQAGADAPAGSGAPVGSPAPAG
FDAPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_49940 YP_005464730.1 putative two-component system response regulator BAC0083 Protein 2e-27 44
AMIS_49940 YP_005464730.1 putative two-component system response regulator BAC0125 Protein 2e-27 43
AMIS_49940 YP_005464730.1 putative two-component system response regulator BAC0308 Protein 2e-25 43
AMIS_49940 YP_005464730.1 putative two-component system response regulator BAC0197 Protein 8e-24 43
AMIS_49940 YP_005464730.1 putative two-component system response regulator Y16952.3.orf35.gene. Protein 2e-18 42
AMIS_49940 YP_005464730.1 putative two-component system response regulator BAC0638 Protein 5e-18 42
AMIS_49940 YP_005464730.1 putative two-component system response regulator U82965.2.orf14.gene. Protein 4e-18 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_49940 YP_005464730.1 putative two-component system response regulator VFG1386 Protein 2e-27 45
AMIS_49940 YP_005464730.1 putative two-component system response regulator VFG1390 Protein 3e-30 43
AMIS_49940 YP_005464730.1 putative two-component system response regulator VFG0596 Protein 1e-24 41