Gene Information

Name : AMIS_43280 (AMIS_43280)
Accession : YP_005464064.1
Strain : Actinoplanes missouriensis 431
Genome accession: NC_017093
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4536400 - 4537173 bp
Length : 774 bp
Strand : -
Note : -

DNA sequence :
GTGACACGGCTCAACGCCCGAGGACTGACCCTCGGATACGACGACCGGGCGGTCGTGACCGATCTGGACGCCGACATCCT
CGACGGGAAGGTGACGGCGATCGTCGGCGCCAACGCCTGCGGCAAGTCGACGCTGCTGCGCGGCCTGGCCCGGCTGCTCA
AACCCCGGGCCGGCGAGGTACGGCTGGACGGCGCGGTGATGAGCGGGATGAGCACGGTCGAGGTGGCGAAGGTGCTCGGC
CTGCTGCCGCAGTCACCGGTCGCGCCGGCCGGGGTGACCGTCGCCGACCTGGTCGCGCGGGGACGCTACCCGCATCAGGG
CTGGTTCCGCCGGTGGACCGACGGCGATCACGAGGCGGTGGCCCGGGCGCTCGAGGCGACCGGCACCGCTGATCTCGCCG
ACCGGCCGTTGCAGCAGCTCTCCGGCGGGCAGCGGCAGCGGGTGTGGGTGGCGATGGCGCTCGCGCAGGACACCGACCTG
CTGCTGCTCGACGAGCCGACCACGTTCCTCGACATCAACCATCAGGTGGAGCTGCTCCGGCTGCTGCGCACGCTGAACGA
GGACGCCGGCAAGACGATCGTCGCGGTGCTGCACGATCTCAACCTGGCCAGCCGTTTCTGCGACCACGTCATCGCGATGG
CCGGCGGCGCCATCGTCGCCGAGGGGCCGCCGGCCGAGGTGATCACCGCGGAGCTGGTGGCGAAGGTGTTCGGGCTGAGC
TGCGTCATCGTGACCGATCCGGTCGCCGGGACGCCGATCGTGGTGCCCGCCTGA

Protein sequence :
MTRLNARGLTLGYDDRAVVTDLDADILDGKVTAIVGANACGKSTLLRGLARLLKPRAGEVRLDGAVMSGMSTVEVAKVLG
LLPQSPVAPAGVTVADLVARGRYPHQGWFRRWTDGDHEAVARALEATGTADLADRPLQQLSGGQRQRVWVAMALAQDTDL
LLLDEPTTFLDINHQVELLRLLRTLNEDAGKTIVAVLHDLNLASRFCDHVIAMAGGAIVAEGPPAEVITAELVAKVFGLS
CVIVTDPVAGTPIVVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-56 53
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-50 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-50 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-50 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-50 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-42 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-48 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-48 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-40 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-40 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-40 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-40 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-40 43
irp6C NP_938506.1 ATP-binding protein Irp6C Not tested Not named Protein 4e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_43280 YP_005464064.1 putative ABC transporter ATP-binding protein BAC0164 Protein 2e-42 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_43280 YP_005464064.1 putative ABC transporter ATP-binding protein VFG0925 Protein 2e-60 55
AMIS_43280 YP_005464064.1 putative ABC transporter ATP-binding protein VFG1042 Protein 1e-42 46