Gene Information

Name : AMIS_35470 (AMIS_35470)
Accession : YP_005463283.1
Strain : Actinoplanes missouriensis 431
Genome accession: NC_017093
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3713055 - 3713897 bp
Length : 843 bp
Strand : -
Note : -

DNA sequence :
GTGACCACTGACCACACCCTCACGGCGGAAAACCTGACCATCGGGTACGGGGACCGCGTCGTCATCGAGAACCTGGACCT
GCTCGTGCCGCCCGGCCGGATCACCGCGATCGTGGGCGCCAACGCGTGCGGCAAGTCCACGCTGCTCCGCTCGATGTCCC
GGCTGCTCGCGCCGCGGGCCGGGCACGTGCTGCTGGACGGCCGCGAGGTGCACCGGATGCCGGCCAAGGAGCTGGCCCGC
ACGCTGGGACTCCTCCCCCAGTCCCCGATCGCGCCGGAGGGCATCACGGTCGCCGACCTGGTCGGCCGGGGCCGCAACCC
GCACCAGCGAATCCTGTCCCGGTGGAGCCGCCAGGACGATCTCGCGGTGGCCGCCGCGCTTGATGCCACGCACACCGCGG
AGCTGGCCGATCGCTCGGTCGACGAGCTCTCCGGCGGCCAGCGCCAGCGGGTCTGGATCGCGATGGCGCTGGCCCAGCAG
ACCGAGGTGCTGCTGCTCGACGAGCCGACCACGTTCCTGGACGTCAGCCATCAGGTCGAGGTGCTGGACCTGCTCACCGA
CCTGAACGCGGACCGGGGCACCACGATCGTGATGGTGCTGCACGACCTGAACATGGCCGCCCGGTACGCCGACCACCTGA
TCGCCCTGGCCGCCGGCAGCCTGCACGCGGCGGGCGACCCGGCCACCGTGCTCACCGAGGACTGCGTGCGCGCGGTGTTC
GGCCTGGACAGTCAGGTGATCGTCGACCCGGTCTCGGGCAAGCCGCTGATGCTGCCGATCGGCCGGCACCACGTCCGCGA
TCAGGCGGCCGAGCCACGCGCGGACCAGGCCGCCCAGAGCTGA

Protein sequence :
MTTDHTLTAENLTIGYGDRVVIENLDLLVPPGRITAIVGANACGKSTLLRSMSRLLAPRAGHVLLDGREVHRMPAKELAR
TLGLLPQSPIAPEGITVADLVGRGRNPHQRILSRWSRQDDLAVAAALDATHTAELADRSVDELSGGQRQRVWIAMALAQQ
TEVLLLDEPTTFLDVSHQVEVLDLLTDLNADRGTTIVMVLHDLNMAARYADHLIALAAGSLHAAGDPATVLTEDCVRAVF
GLDSQVIVDPVSGKPLMLPIGRHHVRDQAAEPRADQAAQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-61 52
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-65 51
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-65 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-52 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-51 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-51 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-51 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-51 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-47 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_35470 YP_005463283.1 putative ABC transporter ATP-binding protein BAC0164 Protein 3e-52 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_35470 YP_005463283.1 putative ABC transporter ATP-binding protein VFG0925 Protein 3e-64 54
AMIS_35470 YP_005463283.1 putative ABC transporter ATP-binding protein VFG1042 Protein 3e-52 49