Gene Information

Name : AMIS_29250 (AMIS_29250)
Accession : YP_005462661.1
Strain : Actinoplanes missouriensis 431
Genome accession: NC_017093
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3071839 - 3072645 bp
Length : 807 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGACCTGCGCGCCACCGGCCTCGGCCTCGCCTACGACGGCCGAGCCGTGGTGACCGGCCTCGACCTGCGGATCGC
TCCCGGGAAGATCACCGCCGTGGTCGGCCCCAACGCCTGCGGCAAGTCGACGCTGCTGCGCGGCCTGGCCCGGCTGATGC
GCCCGGAGAGCGGCACGGTGCTGCTCGGCGGCGCCGACATCCACCGGCTGCCGACCCGCGAGGTCGCCACCCGCATCGGC
GTGCTGCCCCAGCAGCCGGTCGCCCCGGACGGCATCACCGTCGCCGACCTGGTCGCCCGGGGACGCCAGCCGCACCAGAA
ATGGCTGCGGCAGTGGACGCCCGCGGACGAGCAGGCGGTGACCGCCGCCCTGGCCGCGACAGGCATCACCGCCCTGGCCG
ACCGGCCCGTCGACGAGCTCTCCGGCGGGCAGCGGCAGCGGGTCTGGATCGCCCTGGTCCTCGCCCAGGACACCGACCTG
CTGCTGCTCGACGAACCGACCACGTTCCTCGACCTCGCCCACCAGCTCGAGGTCCTCGACCTGCTCACCGACCTCAACGC
GGACGGCCGCACGGTCGTCGCCGTGCTGCACGACCTCAACATGGCCTGCCGCTACGCCCATGAGATCGTCGCGATGCGGG
ACGGCGCGGTGGTCGCGCAGGGCCCACCCGCCGAGATCGTCGACGCCGGGCTGGTCGAGACGGTCTTCGGCGTCCGGGCC
CGGGTCATCACCGACCCGACGACCGGCACTCCGCTCGTCCTGCCCGAACCGACGCATGGACGGCCCCGGCATCCGGTTGT
CTACTGA

Protein sequence : 
MTDLRATGLGLAYDGRAVVTGLDLRIAPGKITAVVGPNACGKSTLLRGLARLMRPESGTVLLGGADIHRLPTREVATRIG
VLPQQPVAPDGITVADLVARGRQPHQKWLRQWTPADEQAVTAALAATGITALADRPVDELSGGQRQRVWIALVLAQDTDL
LLLDEPTTFLDLAHQLEVLDLLTDLNADGRTVVAVLHDLNMACRYAHEIVAMRDGAVVAQGPPAEIVDAGLVETVFGVRA
RVITDPTTGTPLVLPEPTHGRPRHPVVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-49 52
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-45 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-41 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-47 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-47 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-47 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-47 48
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 9e-46 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 9e-46 44
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 4e-27 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-39 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-39 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-39 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_29250 YP_005462661.1 putative ABC transporter ATP-binding protein BAC0164 Protein 7e-46 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_29250 YP_005462661.1 putative ABC transporter ATP-binding protein VFG0925 Protein 1e-52 56
AMIS_29250 YP_005462661.1 putative ABC transporter ATP-binding protein VFG1042 Protein 6e-46 48