Gene Information

Name : AMIS_2110 (AMIS_2110)
Accession : YP_005459947.1
Strain : Actinoplanes missouriensis 431
Genome accession: NC_017093
Putative virulence/resistance : Virulence
Product : putative flagellar biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 235809 - 236078 bp
Length : 270 bp
Strand : +
Note : fliQ?

DNA sequence :
ATGACGGACACGATGGTGGTGGAACTCGCGCTCCAGGCCATGACCATCTCGGCGAAACTGGCAGCGCCGGTACTGCTGAC
CGCGCTCGGCGTCGGCTTCGTGATCTCGCTCTTCCAGTCGGTGACCCAGATCCAGGAGGCGACGCTCTCGTTCGTCCCGA
AAGCGATCGCGATCGGGGTGGCGCTGCTGCTCACCGGCAACTGGATGCTGCGCGAGATGCTGACCTTCACGACACAGCTG
TACGAGAAGATCCCGCAGCTCCTGGCGTAG

Protein sequence :
MTDTMVVELALQAMTISAKLAAPVLLTALGVGFVISLFQSVTQIQEATLSFVPKAIAIGVALLLTGNWMLREMLTFTTQL
YEKIPQLLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 7e-10 46
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 9e-08 43
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 2e-07 42
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 2e-07 42
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 2e-07 42
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-08 41
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMIS_2110 YP_005459947.1 putative flagellar biosynthesis protein VFG2495 Protein 3e-08 54
AMIS_2110 YP_005459947.1 putative flagellar biosynthesis protein VFG2339 Protein 6e-10 44
AMIS_2110 YP_005459947.1 putative flagellar biosynthesis protein VFG0187 Protein 0.17 44
AMIS_2110 YP_005459947.1 putative flagellar biosynthesis protein VFG2015 Protein 1e-09 42