Gene Information

Name : S23_08300 (S23_08300)
Accession : YP_005448162.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 866655 - 868274 bp
Length : 1620 bp
Strand : -
Note : -

DNA sequence :
ATGGCCGCGCCAGCCACCGTTTCCATCAAGAACCTGCAGATCGCACTGCCCCAGGGGGCCGAACGTCCCTTCGCGGTGGA
TGGTATCTCGCTCGACCTGAACGCCGGCAAGATCGTCTGCGTCGTCGGCGAGTCCGGCTCCGGCAAATCGATGTGCGCGC
ATGCGCTGTTGGGCCTGTTGCCCGACACGGTCTCCACCACTTCCGGCGAGATCATGTTCGAGGGCCGCGACCTGCTCAAG
CTCGACGAGGACGGCTGGCGCGATTTGCGTGGCCGCAGACTGGCGATGATCTTCCAGGAGCCGATGACCGCGCTCAATCC
GTTGATGCGGATCGGCGACCAGATGGCGGAAATGTTCGAGGCCCACGGCCTGCTGACGCCGAGAGAGCGGCGCGCCAAGG
CATTGTCGCTGGCGCGCGAGGTCGGCCTGCCCGACCCTGAACGAATCGTTCGCGCCTATCCGCACCAGCTGTCCGGTGGC
CAGCGCCAGCGCGCCATGATCGCGATGGCGCTCGCACTCGAACCGGCCGTGCTGGTCGCGGACGAGCCGACCACCGCGCT
CGATGTCACCACGCAGGCGCAGATCCTCAAGCTGATCCGCAACCTGCAGCGCAACCGCAACATGGCGGTGATGTTCATCA
CCCACGATTTCGGCGTCGTCGCCGACATCGCCGACCAGGTCGTGGTGCTTCGCCACGGCAAGGTCGTGGAGGAAGGCCCC
GCCGCGACCGTCTTCAACAACCCGCAGCACGACTACACCAAGGCGCTCCTCGCCGCCGTGCCGTCGATAGACCCGCCGGC
ACGCCAGCCGCTCGACGACCAGGCCAGAGCCGTCGAGGTCATCGGGTTGGACAAGACCTACGTCACCTCAGGCGGCTGGT
TTCGCAAGGAACGCCGCGTCGATGCCGCGCGCGAGGTCAATTTCAACATCCTCAAGGGCGAGACGCTCGGCCTCGTCGGC
GAATCCGGCTCCGGCAAATCGTCGGTGGCGCGCCTCGTCATGCGGTTGATCGAGGCCGACCGCGGCACGGTGTGGATCGG
CGACACCGAACTCACCTCGCTCTCCGGCAAGGCGCTGCGCGCCGAACGTCATCGTATCCAGATGATCTTCCAGGACCCGT
TCGCCTCGCTCAACCCGCGGCGCAAAGTCGGTCACATCATCGCCGACGGTCCGATCGCGGCCGGCACCACCCCGAAGGTC
GCCTTCGACCGCGCCCGCGATCTCCTGAAGATGGTCGGCCTGGACGCCGGCGCGCTCGACCGCTACCCGCACGAATTCTC
CGGCGGCCAGCGCCAGCGCATCGGCATCGCGCGCGCTCTCGCGCTCGAGCCCGAGATCATCGTCGCCGACGAAGCCGTCT
CCGCGCTCGACGTCTCCGTCCAGGCACAGGTCCTGAGGCTGCTCGAGGATCTCAAGGCGCGCCTTGGCCTGTCGATGCTG
TTCATCACCCATGATCTGCGCGTCGCCGCTCAAATCTGCGACCGAATCGCGGTGATGCAGCGCGGCGTCATCGTCGAGCT
GAAGCCGACCGCGCAGCTGTTCGCCGCGCCGGAGCACGCCTATACGCGCGAGCTGCTGGCCGCGGTGCCGGGACGCAAGG
AACGCGCGCCGGCGGCGTGA

Protein sequence :
MAAPATVSIKNLQIALPQGAERPFAVDGISLDLNAGKIVCVVGESGSGKSMCAHALLGLLPDTVSTTSGEIMFEGRDLLK
LDEDGWRDLRGRRLAMIFQEPMTALNPLMRIGDQMAEMFEAHGLLTPRERRAKALSLAREVGLPDPERIVRAYPHQLSGG
QRQRAMIAMALALEPAVLVADEPTTALDVTTQAQILKLIRNLQRNRNMAVMFITHDFGVVADIADQVVVLRHGKVVEEGP
AATVFNNPQHDYTKALLAAVPSIDPPARQPLDDQARAVEVIGLDKTYVTSGGWFRKERRVDAAREVNFNILKGETLGLVG
ESGSGKSSVARLVMRLIEADRGTVWIGDTELTSLSGKALRAERHRIQMIFQDPFASLNPRRKVGHIIADGPIAAGTTPKV
AFDRARDLLKMVGLDAGALDRYPHEFSGGQRQRIGIARALALEPEIIVADEAVSALDVSVQAQVLRLLEDLKARLGLSML
FITHDLRVAAQICDRIAVMQRGVIVELKPTAQLFAAPEHAYTRELLAAVPGRKERAPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-101 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-84 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-84 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-84 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-84 42