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Name : clpB (S23_63890) Accession : YP_005453683.1 Strain : Bradyrhizobium sp. S23321 Genome accession: NC_017082 Putative virulence/resistance : Virulence Product : ATP-dependent protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 6630721 - 6633360 bp Length : 2640 bp Strand : - Note : - DNA sequence : ATGAACATCGACAAATATACCGAACGCTCCAGGGGCTTCGTCCAGTCCGCGCAATCGCTTGCGGTGCGCGAGGGGCATCA GCAGTTTTCGACCCTGCACGTCCTGAAGGTGCTGCTGGACGACAATGAGGGGCTGGCTGCGGGTCTGATCGACCGCGCCG GTGGCAATTCCCGCGCAATCCTCAAGGCGACCGAGGACGCCCTCGCCAAGGTGCCAAAGGTCTCCGGCGGTGGTGCCGGC CAGATTTATCTCGCGCCCGAGCTCGCCCGCACCTTCGACGCCGCTGAAAAGGCCGGCGAGAAGGCCGGGGACAGCTTCGT CACCGTCGAGCGGCTGCTGCTCGGTCTGACGCTGGAGAAGACCAGCGAAGCCGGCGTGATCCTCGCCAAGGGCGGCGTCA CTCCGCAGAATCTCAACGCCGCGATCGAGGCGCTGCGCAAGGGCCGCACCGCGGACTCGGCAACGGCCGAGAACGCCTAT GACGCGCTGAAAAAATACGCCCGCGACCTGACCCAGGCTGCGCGCGACGGCAAGCTCGATCCGGTCATCGGCCGCGACGA GGAGATTCGCCGTACGATTCAGGTGCTGTCGCGCCGGACCAAGAACAATCCCGTCCTGATCGGCGAGCCCGGCGTCGGAA AGACCGCCATCGTCGAAGGGCTCGCGTTGCGCATTCTGAATGGCGACGTGCCGGAAGGCCTGAAGGACAAGAAGCTGCTG TCGCTCGACATGGGCTCGCTGATCGCGGGCGCCAAATATCGCGGCGAATTCGAGGAGCGGTTGAAAGCCGTTCTGCAGGA GGTCACCTCGGCCGAGGGCTCGATCATCCTGTTCATCGACGAAATGCACACGCTGATCGGGGCCGGCAAGGGCGACGGCG CGATGGACGCGTCGAATTTGCTGAAGCCCGCGCTGGCGCGCGGCGAACTTCATTGCATCGGCGCGACGACCCTGGATGAG TACCGCAAGCACGTCGAAAAGGACGCCGCGCTGGCACGCCGGTTCCAGCCGATCTTCGTGCCGGAGCCGACGGTCGAGGA CACCATTTCGATCCTGCGCGGTCTGAAGGACAAGTACGAGCAGCATCACGGCGTGCGCATCACCGATTCCGCATTGGTGG CCGCGACCACGCTGTCGAACCGCTACATCACCGACCGCTTCCTGCCGGACAAGGCCATCGATTTGATGGACGAGGCGGCA GCGCGGCTGAAGATGCAGGTCGATTCCAAGCCGGAAGAGCTCGATTCCATGGATCGGGAAATCATCCGGCTGAAGATCGA GCAGGAAGCCTTGAAGAAGGAGAGCGATGCCGGTTCGAAGAGCCGCCTGCAGACGCTGGAGAAGGAGCTTGCCGAGCTCG AGGAAAAGTCGTCCGCGCTGACGGCGCGCTGGAGCGCGGAGAAGAACAAGCTGTCCGACGCCCAGAAGCTGAAGGCGGAG CTCGACGGCTTGCGCATCGATCTCGCCGACGCGCAGCGGCGCGGTGAATTCCAGAAGGCCGGCGAGCTGGCCTATGGCCG GATTCCGCAGCTCGAGAAGCAGCTTGCGGATATCGAGGCCAAGGAGAACTCCGGCGAGATGATGGAGGAGGCCGTGACGG CAAACCACATCGCGCAGGTGGTCTCGCGCTGGACCGGCGTGCCCGTCGACAAGATGCTGGAGGGCGAGAAGGAGAAGCTC CTCAAGATGGAAGGGCAGCTCGGACAGCGCGTCGTCGGTCAGGCCGAGGCTGTGCGTGCCGTCGCGACCGCCGTGCGCCG CTCCCGGGCAGGCTTGCAGGACCCGAACCGGCCGATGGGTTCGTTCATGTTCCTGGGGCCCACCGGCGTCGGCAAGACCG AGCTGACCAAGGCGCTCGCCGAATACCTGTTCAACGACGAGACCGCGATGGTTCGCCTCGACATGTCCGAGTACATGGAG AAGCATTCGGTCTCGCGGCTGATCGGCGCGCCTCCGGGCTATGTCGGTTACGACGAGGGCGGTGCGCTCACCGAAGCGGT GCGGCGCCGGCCCTATCAGGTGGTGCTGTTCGACGAGATCGAGAAAGCGCATCCTGATGTGTTCAACGTCCTGTTGCAGG TGCTCGACGACGGCCGACTGACCGACGGACAGGGCCGTACCGTCGATTTCCGCAACACGCTGATCATCATGACCTCGAAC CTCGGTTCGGAATTCCTGGTGAATCAACCGGAGGGCGAAGACACGTCAGCCGTGCGCGAGCACGTGATGGCGACGGTGCG GACGCATTTCAGGCCGGAATTCCTGAACCGCGTCGACGAGATCATCCTGTTCCATCGCTTGCAGAAGAGCGAGATGGGCC GGATCGTCGAGATCCAGTTCAGTCGGCTCGAGAGGCTCCTGACCGATCGCAAGATCGTGCTGACGCTCGATGGCAAGGCA CGCGACTGGCTCGCCGAGAAGGGCTGGGATCCCGCCTACGGCGCAAGGCCGCTGAAGCGGGTGGTCCAGCGCTACGTCCA GGATCCGCTCGCCGAGATGATCCTGGCGGGCGACATCAAGGACGGGGATGCGGTTGCGATCTCGTCCGAAGGCAACGTGC TGACCTTCAACGGCAAGGCCCCGCAGACCGCGGAAATCGCCCAGTTCGAGGCACCGGTGTCGAAGCGCAAGCTGAACTGA Protein sequence : MNIDKYTERSRGFVQSAQSLAVREGHQQFSTLHVLKVLLDDNEGLAAGLIDRAGGNSRAILKATEDALAKVPKVSGGGAG QIYLAPELARTFDAAEKAGEKAGDSFVTVERLLLGLTLEKTSEAGVILAKGGVTPQNLNAAIEALRKGRTADSATAENAY DALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPEGLKDKKLL SLDMGSLIAGAKYRGEFEERLKAVLQEVTSAEGSIILFIDEMHTLIGAGKGDGAMDASNLLKPALARGELHCIGATTLDE YRKHVEKDAALARRFQPIFVPEPTVEDTISILRGLKDKYEQHHGVRITDSALVAATTLSNRYITDRFLPDKAIDLMDEAA ARLKMQVDSKPEELDSMDREIIRLKIEQEALKKESDAGSKSRLQTLEKELAELEEKSSALTARWSAEKNKLSDAQKLKAE LDGLRIDLADAQRRGEFQKAGELAYGRIPQLEKQLADIEAKENSGEMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKL LKMEGQLGQRVVGQAEAVRAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYME KHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSN LGSEFLVNQPEGEDTSAVREHVMATVRTHFRPEFLNRVDEIILFHRLQKSEMGRIVEIQFSRLERLLTDRKIVLTLDGKA RDWLAEKGWDPAYGARPLKRVVQRYVQDPLAEMILAGDIKDGDAVAISSEGNVLTFNGKAPQTAEIAQFEAPVSKRKLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-103 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_005453683.1 | ATP-dependent protease ATP-binding subunit | VFG2076 | Protein | 1e-112 | 45 |
| clpB | YP_005453683.1 | ATP-dependent protease ATP-binding subunit | VFG2084 | Protein | 2e-110 | 43 |
