Gene Information

Name : S23_63130 (S23_63130)
Accession : YP_005453612.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Virulence
Product : capsule expression protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6558944 - 6559930 bp
Length : 987 bp
Strand : +
Note : -

DNA sequence :
ATGACCCAATCGTCCGGCTCCACCCCTGCCAGCGTCGAATCCGCGCTCCGCACGCTGGAGACGGAGAGCGGCGGCATCAA
CGCCCTCGCCGCCGCCCTGCGCGGCCCGCTGGGCGAGACCTTTGCCAAGGCGGTCGATCTGATCCGCAATGCCAAGGGCC
GCGTCATCGTCACCGGGCTCGGCAAGTCCGGCCACATGGCCCGCAAGATCGCGGCGACCCTGGCTTCGACCGGCACGCCG
GCCTTCTTCGTCCACACCGCGGAGGCCGCCCATGGCGACCTCGGCATGATCACCACCGACGACGTCATCATGGCCCTGTC
CTGGTCCGGCGAGCAGCCGGAGATGAAGACCCTCGTGAATTATTCGGCGCGCTTCGCGATCCCGATGATCGCGGTGACGT
CCAGCGCGACGTCCTCGCTGGGCCAGGCCGCCGACCTCGTGATCGAGCTGCCGAAAGCGCGCGAGGCTTGCCCGCACAAT
CTGGCGCCGACCACCTCGACCATGATGCAGGTCGCGATCGGCGACGCCATCGCGATCGCGCTGCTCGAAGGCCGCGGCTT
CACCGCGCTGGAGTTCGCCCACTTCCACCCCGGCGGCAAGCTGGGTGCGATGCTGAAATTCGTCCGCGATTACATGCGCA
CCGGCGCGGAGATTCCGGTCAAGCCGCTCGGCGCCGAGATGTCGGATGCGATCATGGAGATGTCGGCGAAGGGACTGGGC
TGCGTCTGCATCGTCGATGATGCCGGCAGAATCGCAGGCATCATCACCGACGGCGACCTGCGCCGCAACATGCGGCCCGA
TTTGCTGACGGTGGTTGTCGACGACATCATGACGAAGCAGCCAAAGACCGTACCGCCCTCGATGCTCGCCAGCGAGATGA
TCGAGGTACTGAACACGCGCAAGATCACCACGCTGGTCGTAACGGAAGCGGACAAGGTGGTCGGCATCGTGCATCTGCAC
GATCTGCTGCGCGCGGGTGTGGCCTGA

Protein sequence :
MTQSSGSTPASVESALRTLETESGGINALAAALRGPLGETFAKAVDLIRNAKGRVIVTGLGKSGHMARKIAATLASTGTP
AFFVHTAEAAHGDLGMITTDDVIMALSWSGEQPEMKTLVNYSARFAIPMIAVTSSATSSLGQAADLVIELPKAREACPHN
LAPTTSTMMQVAIGDAIAIALLEGRGFTALEFAHFHPGGKLGAMLKFVRDYMRTGAEIPVKPLGAEMSDAIMEMSAKGLG
CVCIVDDAGRIAGIITDGDLRRNMRPDLLTVVVDDIMTKQPKTVPPSMLASEMIEVLNTRKITTLVVTEADKVVGIVHLH
DLLRAGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 7e-51 43
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 4e-51 43
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 1e-50 43