Gene Information

Name : S23_62250 (S23_62250)
Accession : YP_005453525.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Virulence
Product : putative betaine aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6430507 - 6432003 bp
Length : 1497 bp
Strand : -
Note : -

DNA sequence :
ATGGCTGTGTCGCAGGCTATTCCGATCACGCGCCATCCGTTCGCCAACGGGTCCTACAAGCAGATGCTGATCGACGGGAA
GTGGGTCGATGCCGCTTCCGGGAAGCGCTTCGAAACCCACAACCCCGCCACCGGCGAATTGCTGGCAACCGTCGCCGAGG
GCGACAAGGAAGACATCGACCGTGCGGTCGCCGCCGCGCGCCGGGCCTTCGAAGGACCATGGAGCAAGGTCAAGCCGTTC
GAGCGGCAGAACCTGCTCTTGAAGCTCGCTGACCTCGTCGAGAAAAATTTCGACGAATTGTCGCAGCTTGACACGCTCGA
CATGGGCGCGCCGCTCAGCCGCACCCGCGCCTATCGCCTGCGCGCCGTCGGCATGCTGCGCTATTATGCAGGCCAGACCA
CCGCGATCCACGGCGAGACCATCGATAACTCGCTGCCGGGCGAGATTTTCTCTTACACGCTGAAGGAGCCGATCGGCGTC
GTCGGCGCCATCATTCCCTGGAACGGTCCGCTTACCGCGACGATCTGGAAGATCGGTCCGGCGATCGCGACCGGCTGCAC
CGTGGTGCTTAAGCCGGCCGAAGAGGCGCCACTGACCTCGCTGCGCATCGCAGAGCTCGCGATGGAGGCGGGCGTGCCGC
CCGGCGTCATCAACGTGGTGCCGGGCTACGGCGAGACCGCGGGCGCGGCGCTCGCCTCGCATCACGACGTCGACAAGGTC
GCGTTCACCGGCTCGCATGTCACGGGCCAGTCGATCATCCGCGCCTCGGCCGGTAACCTCAAGCGCGTCTCGCTCGAGCT
CGGCGGCAAGTCGCCGGACATCGTGTTCGCGGATGCCGATCTCGATGCCGCCGTGCCCGGCGCCGCGATGGCGGTGTTCG
CCAATTCCGGCCAGATCTGCAGTGCCGGTACGCGCCTGTTCGTCGAGCAGTCGATCTACGAAGAGTTCGTCGGTCGTGTC
GCCGAGTTTGGCAAGAAGCTGCAGGTCGGCAACGGCCTCGATCCCAACGTGCAGATCGGCCCGCTGGTCTCCGAGCAGCA
GCTCGAACGGGTCACGAGCTATCTCGACATCGGCCAGAAGGAAGGCGCCCGCGCGCTCGCCGGCGGCGGTCGTGTCACCG
AGGGTGCGCTGTCAAAGGGCTTCTTCGTCTCGCCGACGGTGTTCGCGGGCGTCCAGGACAACATGCGCATCGCGCAGGAA
GAGATTTTTGGTCCGGTCATCTCCGCGATTGCGTTCAAGGACATGGACGAACTGGTGAAGCGCGCCAACGCCACCACGTT
CGGCCTCGGATCCGGCCTGTGGACGCGCGACGTCAGCAAGGCGCATGCGGTGGCGAAGAGCCTGCGTGCCGGCTCGGTGT
GGGTGAATTGCTACCAGGCGATGGACCCGGCCGTGCCGTTCGGCGGCTACAAGATGAGCGGTTACGGCCGCGAGTCCGGC
AAGCAGCATGTCGAGGAATATCTCAACGTGAAGGCCGTCTGGATCAAGACGGCGTAA

Protein sequence :
MAVSQAIPITRHPFANGSYKQMLIDGKWVDAASGKRFETHNPATGELLATVAEGDKEDIDRAVAAARRAFEGPWSKVKPF
ERQNLLLKLADLVEKNFDELSQLDTLDMGAPLSRTRAYRLRAVGMLRYYAGQTTAIHGETIDNSLPGEIFSYTLKEPIGV
VGAIIPWNGPLTATIWKIGPAIATGCTVVLKPAEEAPLTSLRIAELAMEAGVPPGVINVVPGYGETAGAALASHHDVDKV
AFTGSHVTGQSIIRASAGNLKRVSLELGGKSPDIVFADADLDAAVPGAAMAVFANSGQICSAGTRLFVEQSIYEEFVGRV
AEFGKKLQVGNGLDPNVQIGPLVSEQQLERVTSYLDIGQKEGARALAGGGRVTEGALSKGFFVSPTVFAGVQDNMRIAQE
EIFGPVISAIAFKDMDELVKRANATTFGLGSGLWTRDVSKAHAVAKSLRAGSVWVNCYQAMDPAVPFGGYKMSGYGRESG
KQHVEEYLNVKAVWIKTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-78 46
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-72 44
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-75 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-77 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-77 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-77 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S23_62250 YP_005453525.1 putative betaine aldehyde dehydrogenase VFG0082 Protein 2e-75 41