Gene Information

Name : glcA (S23_61680)
Accession : YP_005453468.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Unknown
Product : putative glycolate/lactate permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6364441 - 6366105 bp
Length : 1665 bp
Strand : -
Note : -

DNA sequence :
ATGTGGAATCAAGTCTATGATCCGCTGCACAGCCCTGTGTTGTCGACGATCGCGGCGGCGGTGCCTGTCGTCACGCTGCT
GGTTCTGATCGCGAGCGGCCGCGTCCAGGCTCATATTGCGGCGATCATCGCCGTGATCGTGGCCAATCTGATCACGATCT
TCGTCTTCACCATGCCGGCGAACATGTCGATCCGCGCCTCGGTGCTGGGCATCGTGACCGGCTTCTTCCCCATCGGCTGG
ATCGTTCTCAACGTCATCTTCCTCTATCAGGTGACGGTATCGACAGGGCGCTTCGAACTCCTCAAGCGCGCGATCGGTGG
CGTCACCGAGGACCGGCGGCTGCAATTGCTGCTGATCGCATTCTCCTTCGGTGCCTTCTTCGAGGGCGCCTCGGGCTTCG
GCACGCCGGTGGCAATCACGGGTGCGGTGCTGATCGGCCTCGGCTTTTCGCCGCTTGCGGCAAGCGGCCTGTCGCTGATC
GCCAACACCGCGCCGGTCGCCTATGGCGCGCTGGGCACGCCGATCCAGGGTCTTGCCTCGGTCACCGGGTTCGATCCCTA
CATCCTGGGTGCGATGGTCGGACGGCAGTTGCCGTTCTTCTCGCTGATCGTGCCGTTCTGGGTGATATGGGCTTTTGCCG
GATGGAAAGGCATGAAGGACGTCTGGCCGGCGATCCTGGTCACCGGCGTATCGTTCGCCGTCCCGCAATTCGTGATCTCG
AATTACATCAATCCTTGGATTGTCGACATCGGCGCGTCGCTGATCTCGATGGGTGCGCTGATCCTGTTCCTGAAGGTCTG
GCAGCCGAAGCAGCTCTGGCTGTCGCCTGCGCTACGCGGCAATGATGAATCGGCCTCCACCATGGCCACTGCAAAGCCGC
TCGACAAGACGCCGCTCACGCAGAGCGAGCTGTTCAGCGCGCTGCTGCCCTGGATCATCGTCTGTATCGTGATGCTGGTC
TGGGGCAACGGCGGCTTCAAGACCTGGGCAAACTCGATCTTCACCTGGAACTATCCCGTTCCCGAACTGCATCAGATGAT
CAACAAGATGCCGCCGGTCGCGCCAGGGCCGACGAAAGAGAGCGCGGTGTTCGGCTTCACCTACCTCTCCTTCACCGGCA
CGGGCATGCTGATCGCCGCAATCATCTCCGGCTTCCTGATGGGCGTCGGTCCCGGCCAACTCGTGACCCAGTACGGCCGC
ACCATCCGGCTGTGCGCGATCTCGCTGATCACGATCTCGGCGATGCTCGCGATCGGCACGCTGACGCGGCTCTCCGGTGT
CGACGCGACGCTCGGCCTCGCCTTCGCTGCAACCGGCGTGCTCTATCCCTTCTTCGGCACGCTGCTCGGCTGGCTCGGCG
TGGCGCTGACGGGGTCGGATACGTCGTCGAACATCCTGTTCGGCAATTTGCAGAAGATCACCTCCGAACAGCTCGGCATA
TCGCCGATCTTGATGGCCGCCGCGAACTCCTCCGGCGGCGTGATGGGCAAGATGATCGACGCGCAGTCGATCGTGGTCGC
CTCCACCGCGACCAACTGGTACGGCCACGAGGGCACGATTTTGCGCTTCGTGTTCTGGCACTCGATCGTGCTCGCCTGTC
TCGTCGGTGTGCTCGTGACGCTGCAGGCCTATGTCTGGCCGTTCACGGCGATGGTCCTGAAGTAG

Protein sequence :
MWNQVYDPLHSPVLSTIAAAVPVVTLLVLIASGRVQAHIAAIIAVIVANLITIFVFTMPANMSIRASVLGIVTGFFPIGW
IVLNVIFLYQVTVSTGRFELLKRAIGGVTEDRRLQLLLIAFSFGAFFEGASGFGTPVAITGAVLIGLGFSPLAASGLSLI
ANTAPVAYGALGTPIQGLASVTGFDPYILGAMVGRQLPFFSLIVPFWVIWAFAGWKGMKDVWPAILVTGVSFAVPQFVIS
NYINPWIVDIGASLISMGALILFLKVWQPKQLWLSPALRGNDESASTMATAKPLDKTPLTQSELFSALLPWIIVCIVMLV
WGNGGFKTWANSIFTWNYPVPELHQMINKMPPVAPGPTKESAVFGFTYLSFTGTGMLIAAIISGFLMGVGPGQLVTQYGR
TIRLCAISLITISAMLAIGTLTRLSGVDATLGLAFAATGVLYPFFGTLLGWLGVALTGSDTSSNILFGNLQKITSEQLGI
SPILMAAANSSGGVMGKMIDAQSIVVASTATNWYGHEGTILRFVFWHSIVLACLVGVLVTLQAYVWPFTAMVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcA CAE85240.1 GlcA protein, putative glycolate permease Not tested PAI V 536 Protein 2e-93 46