Gene Information

Name : S23_49380 (S23_49380)
Accession : YP_005452244.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Resistance
Product : dihydropteroate synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5047397 - 5048323 bp
Length : 927 bp
Strand : +
Note : -

DNA sequence :
ATGGAGTGGCGCGCACTGCCCAATCCCGCCTTGAATCCCCCCTCCCCGACCGCTAAAGCGGGCGGCATGAACGCCTCGCC
ATCCTCATCCGTCCCCCAGGCCGGCTCGGCCGGGCCTGACGTGCTGCGGACATTGCTGGAACGGCCGATCCCGGCAGTGA
TGGGCGTGCTCAACATCACCCCGGACTCCTTCTCCGACGGCGGCGAGTTCATTGCGCCCGCGCTGGCGCTGCAGCGGGCA
CGGGCGATGATCGATGCCGGCGTCGACATCATCGACATCGGCGCGGAATCGACCCGGCCCTACACGGGCGCCCGGCCGGT
CACGGCGGCGGACGAGATCGCCCGGCTGAAGCCGGTGCTGGCCGACCTGGTGGCGCTCGGCGTGCCCGTGTCGATCGACA
GCATGAAGGCGGAGGTCGTGGCTTTCGCACTCGACCAGGGCGTTGCGATCGCCAACGACGTCTGGGGCCTGCAACGCGAC
GCCGCCATGGCGCCGCTGGTCGCCGCCAGGAGCGTCCCCGTCATCGTCATGCACAACCGCGACAACGTCGATTCTACCAT
CGACATCGTCGCGGACATGAAGACGTTCTTCCTCCTCTCGCTGGATATCGCCGCCAAAGCCGGCATTGCGCGCGAGAAGA
TCGTGCTCGATCCCGGCATCGGCTTTGGCAAGACCGCCGAGCAGAGCATGATCGCGCTGGCGCGCTTGCGCGAATTCGAC
ATGTTCGGCCTACCGATCCTGGTCGGCGCCTCGCGCAAGCGCTTCATCGCCTCGGTGTCGCCGTCGGAGCCGAAAGAACG
GCTCGCGGGCTCGATCGCCGCGCACCTGATCGCCGCCCAGCACGGCGCCAGGATCATCCGGACCCACGATGTCGCCGAGA
CCTTGCAGGCCCTGCGGGTGGCACACGCAATCGAGAGCAAGCAATGA

Protein sequence :
MEWRALPNPALNPPSPTAKAGGMNASPSSSVPQAGSAGPDVLRTLLERPIPAVMGVLNITPDSFSDGGEFIAPALALQRA
RAMIDAGVDIIDIGAESTRPYTGARPVTAADEIARLKPVLADLVALGVPVSIDSMKAEVVAFALDQGVAIANDVWGLQRD
AAMAPLVAARSVPVIVMHNRDNVDSTIDIVADMKTFFLLSLDIAAKAGIAREKIVLDPGIGFGKTAEQSMIALARLREFD
MFGLPILVGASRKRFIASVSPSEPKERLAGSIAAHLIAAQHGARIIRTHDVAETLQALRVAHAIESKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sul2 AEZ06044.1 Sul2, sulphonamide-insensitive dihydropteroate synthase Not tested Tn6167 Protein 2e-27 42
sul2 AEA34678.1 dihydropteroate synthase Not tested Not named Protein 2e-27 42
sulI2 AFV47959.1 sulphonamide-insensitive dihydropteroate synthase SulI2 Not tested AbaR25 Protein 2e-27 42
BJAB0868_00253 YP_008211579.1 Dihydropteroate synthase-related enzyme Not tested AbaR26 Protein 3e-27 42
ABK1_0255 YP_005512827.1 Dihydropteroate synthase type-2 Not tested AbaR4d Protein 3e-27 42
BJAB07104_00246 YP_008207711.1 Dihydropteroate synthase-related enzyme Not tested AbaR25 Protein 3e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S23_49380 YP_005452244.1 dihydropteroate synthase AM180355.1.gene1650. Protein 1e-48 48
S23_49380 YP_005452244.1 dihydropteroate synthase CP000647.1.gene3624. Protein 6e-35 45
S23_49380 YP_005452244.1 dihydropteroate synthase CP001138.1.gene3456. Protein 6e-36 44
S23_49380 YP_005452244.1 dihydropteroate synthase NC_002695.1.916103.p Protein 2e-35 43
S23_49380 YP_005452244.1 dihydropteroate synthase CP002695.1.gene1085. Protein 2e-32 43
S23_49380 YP_005452244.1 dihydropteroate synthase CP000675.2.gene3019. Protein 1e-36 43
S23_49380 YP_005452244.1 dihydropteroate synthase CP000034.1.gene3358. Protein 5e-34 43
S23_49380 YP_005452244.1 dihydropteroate synthase AE000516.2.gene3902. Protein 2e-31 41
S23_49380 YP_005452244.1 dihydropteroate synthase NC_002516.2.881715.p Protein 2e-35 41
S23_49380 YP_005452244.1 dihydropteroate synthase DQ464881.1.gene2.p01 Protein 3e-27 41
S23_49380 YP_005452244.1 dihydropteroate synthase NC_002758.1120474.p0 Protein 5e-26 41
S23_49380 YP_005452244.1 dihydropteroate synthase NC_009782.5559617.p0 Protein 5e-26 41
S23_49380 YP_005452244.1 dihydropteroate synthase NC_002745.1123263.p0 Protein 5e-26 41
S23_49380 YP_005452244.1 dihydropteroate synthase NC_013450.8613224.p0 Protein 5e-26 41