Gene Information

Name : S23_48710 (S23_48710)
Accession : YP_005452177.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Virulence
Product : putative Two-component transcriptional regulatory protein involved in heavy-metal (Cu/Zn) homeostasis
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4980361 - 4981062 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
TTGACCGCCGCCGAACGCACGATGCGCCTCCTCATCATCGAAGACGACCGCGAATCCGCCGACTATCTCGTGAAGGCGTT
TCGCGAGGTCGGACATATTGCCGACCACGCCGCAGACGGCGAGGAAGGCCTCGCCATGGCCGAGAACGGCGAATACGACG
TGTTGGTGGTCGATCGCATGCTGCCCAAGCGCGACGGCCTGTCGCTGATCGGTGTCTTGCGCGACAAGGGCAACACCACC
CCGGTGTTGATTCTCTCGGCGCTCGGCCAGGTCGACGACCGCATCAAGGGCCTGCGCGCCGGCGGCGACGACTATCTGCC
GAAGCCCTATTCCTTCGCCGAGCTGCTGGCCCGCGTCGAGGTGCTGTCGCGCCGCCGCGGCGGCCCGGCCGAGGACACGC
TCTATCGCGTCGGCGACCTCGAGCTTGACCGGCTGTCCCATCGCGTCGCCCGCGGCAAGGACGAGCTGACGCTGCAGCCG
CGCGAATTCCGTCTGCTCGAATATCTGATGAAGCATGCCGGCCAGGTGGTGACACGCACCATGCTGCTGGAAAATGTCTG
GGACTATCACTTCGATCCGCAGACCAACGTGATCGACGTGCACATTTCGCGGCTGCGCTCCAAGATCGACAAGGGTTTTG
AGCGGCCGCTGCTGCACACGATCCGCGGCGCCGGGTACATGATCCGTGACGGCATTCGGTAA

Protein sequence : 
MTAAERTMRLLIIEDDRESADYLVKAFREVGHIADHAADGEEGLAMAENGEYDVLVVDRMLPKRDGLSLIGVLRDKGNTT
PVLILSALGQVDDRIKGLRAGGDDYLPKPYSFAELLARVEVLSRRRGGPAEDTLYRVGDLELDRLSHRVARGKDELTLQP
REFRLLEYLMKHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIDKGFERPLLHTIRGAGYMIRDGIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S23_48710 YP_005452177.1 putative Two-component transcriptional regulatory protein involved in heavy-metal (Cu/Zn) homeostasis BAC0125 Protein 7e-49 47
S23_48710 YP_005452177.1 putative Two-component transcriptional regulatory protein involved in heavy-metal (Cu/Zn) homeostasis BAC0083 Protein 2e-46 46
S23_48710 YP_005452177.1 putative Two-component transcriptional regulatory protein involved in heavy-metal (Cu/Zn) homeostasis BAC0197 Protein 5e-45 46
S23_48710 YP_005452177.1 putative Two-component transcriptional regulatory protein involved in heavy-metal (Cu/Zn) homeostasis BAC0347 Protein 9e-47 44
S23_48710 YP_005452177.1 putative Two-component transcriptional regulatory protein involved in heavy-metal (Cu/Zn) homeostasis BAC0111 Protein 1e-52 44
S23_48710 YP_005452177.1 putative Two-component transcriptional regulatory protein involved in heavy-metal (Cu/Zn) homeostasis BAC0308 Protein 1e-43 44
S23_48710 YP_005452177.1 putative Two-component transcriptional regulatory protein involved in heavy-metal (Cu/Zn) homeostasis BAC0638 Protein 2e-38 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S23_48710 YP_005452177.1 putative Two-component transcriptional regulatory protein involved in heavy-metal (Cu/Zn) homeostasis VFG1389 Protein 3e-34 44
S23_48710 YP_005452177.1 putative Two-component transcriptional regulatory protein involved in heavy-metal (Cu/Zn) homeostasis VFG0596 Protein 2e-38 41