Gene Information

Name : S23_45550 (S23_45550)
Accession : YP_005451861.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4644715 - 4646421 bp
Length : 1707 bp
Strand : -
Note : -

DNA sequence :
ATGGCCATTCAGTCCCGCCGCGCCTATGGCGAACTCTACGGGCCGACCAAGGGCGATCTCGTGCGGCTGGCCGATACCAG
TCTACTGGCCGAGATCGAACACGATTACACCACCTATGGACATGAGCTGCTGGTCGGCGCGGGTAAAAACCTGCGCGACG
GCGAGGGCGTCAACGCCTACCGGACGGCATCGCATAAGATCCTGGATGTCGTCATCAAGAACGCCACGATCGTCGACGCG
GTCGCCGGTATCGTGAAGGCCGATATCGGCATCCGCGACGGCCGAATCGTCGGCATCGGCAAGGCCGGCAATCCCGACGT
GATGCCGGATGTGCATCCCGATATGGTCGTCGGTCACACCACGGCGCCGATTGCCGGCGGTCCCTTCATCGTCACCGCCG
GTGCCGTCGAGTCGCACGCCCATTTGATCTCGCCCGAGCAATCCGACCACGCGCTCTCCGGCGGCACCACGACGCTGGTC
GGCAACGGGTCGGGTCCGGTATTCGACGTCGGCAGCGGTGCCGCTTCGACCTTCGCGCGCTTCCTCCAGGCAATCGAGTT
CTCGCCTCTCAATTTTGCGCTGTTCGGACGGGCCGGGTCCAATCCCGAGGCCGTCGAGGAAGCGGTTGCCTCGGGCGGCA
TGTCGGTGAAGATTCACGAGGATTTCGGTGCCGCTCCTGCCGTGATCGACCAGAGCCTGATTGCCGCGGACCGCAACGAC
TTCGCAGTTCACCTTCACACCGACTCGATCAACGAATACGGCTTCTGCGAGGATACGATGGCGGCCGTCGAAGGCCGCAC
GATCCACATGTATCACGTGGAGGGCGCGGGCGGCGGCCACGCGCCGGATCTGCTCAAGGTGGTATCGTGGGACAACGTCA
TTCCGTCGTCCACCAATCCGACCAACCCCTACACGTCCTACGGCATGGAAGAAGGCGTGCCGATGACCATGATCTGTCAT
CAACTCAATTACAACGCGCCCGAGGACGTGATGTTCGGAGAAGCGCGGGTGCGCGCCCAATCCATGGCGGCGGAGGATTT
CCTCCACGACATGGGCGCGATATCGATATTCGGCACCGATACGCAAGGCATGGGACGTCTCGCCGAGAACGTTGCCAAGT
GCTGGCAGCTTGCCAGCGTGATGAAAGATCGCATCGGCCGTCTACCGGAAGAGAAGACGGCGCGCGCGGACAATGAGCGC
ATCAAGCGTTACATCGCCAAGCTCACCATCAATCCCGCGATCGCGGTCGGCATCGATCACACGGTCGGCTCGATCGAGCC
CGGCAAGATGGCTGATCTCGTGCTCTGGCCACGGGCATCCTTCGGGATCAAGCCCTATATGGTGATCAAGAACGGCTTCG
TCGTCTGGGCCGCCATGGGTGACGGCAACGGCAGCCTCGGTCTGTCGGAGCCGATGATCCAGAAGCGGATGTGGGGCGCG
CTCGGAGCCGCCCCGCAAAGGCTGGGTGTCAACTTCATGTCGAAGCTCGCCATGGAAGCCGACGTGAGCCGCAAGCTCGG
CCTGTCCCGTGACCCCGTCCAGATCAAGAACGTGCGAAAGCTGCGCAAAACCGACATGGTACGCAATGTTGCCATGCCCC
ATGTCGATGTCGATCCGCAGACGTTTGAGGTTCGCGCCGACGGCAAGCTGCTGATGTGTCCGCCTGCGACGAAGGTGCCG
CTGGCCAGACGGTACATGCTGCGATGA

Protein sequence :
MAIQSRRAYGELYGPTKGDLVRLADTSLLAEIEHDYTTYGHELLVGAGKNLRDGEGVNAYRTASHKILDVVIKNATIVDA
VAGIVKADIGIRDGRIVGIGKAGNPDVMPDVHPDMVVGHTTAPIAGGPFIVTAGAVESHAHLISPEQSDHALSGGTTTLV
GNGSGPVFDVGSGAASTFARFLQAIEFSPLNFALFGRAGSNPEAVEEAVASGGMSVKIHEDFGAAPAVIDQSLIAADRND
FAVHLHTDSINEYGFCEDTMAAVEGRTIHMYHVEGAGGGHAPDLLKVVSWDNVIPSSTNPTNPYTSYGMEEGVPMTMICH
QLNYNAPEDVMFGEARVRAQSMAAEDFLHDMGAISIFGTDTQGMGRLAENVAKCWQLASVMKDRIGRLPEEKTARADNER
IKRYIAKLTINPAIAVGIDHTVGSIEPGKMADLVLWPRASFGIKPYMVIKNGFVVWAAMGDGNGSLGLSEPMIQKRMWGA
LGAAPQRLGVNFMSKLAMEADVSRKLGLSRDPVQIKNVRKLRKTDMVRNVAMPHVDVDPQTFEVRADGKLLMCPPATKVP
LARRYMLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 3e-106 48
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-104 48
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 3e-106 48
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-104 48
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 4e-104 48
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-104 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S23_45550 YP_005451861.1 urease subunit alpha VFG0270 Protein 1e-103 46