Gene Information

Name : lpdA (S23_03930)
Accession : YP_005447728.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Unknown
Product : dihydrolipoamide dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 397190 - 398590 bp
Length : 1401 bp
Strand : +
Note : -

DNA sequence :
ATGGCATCCTACGATCTCGTCGTCATCGGCACCGGACCTGGCGGTTATGTCTGCGCGGTGCGCGCGGCCCAGCTTGGCAT
GAAAGTCGCCGTGGTGGAGAAGAACGCCACGCTCGGCGGCACCTGCCTCAATGTCGGCTGCATGCCGTCGAAGGCGCTGC
TGCACGCCTCCGAGATGTTCGAGGAAGCCGGGCACTCCTTCGCCAAGATGGGCGTCAGCGTCTCCGCGCCGAAGCTCGAA
CTGCCGGCGATGATGAACTTCAAGCAGCAGGGCATCGACGGCAACGTCAAGGGTGTCGAGTTCCTGATGAAGAAGAACAA
GATCGACGTGCTCAAGGGCACCGGCAAGATCCTCGGCGCCGGCAAGGTCGAAGTGTCGGCCGACGGCAAGTCGCAGACGA
TCGAGACCAAGAGCATCGTGATCGCCACCGGCTCCGACATCGCGCGCCTCAAGGGCATCGAGATCGACGAGAAGCGCATC
GTGTCGTCGACCGGCGCGCTGTCGCTCGACAAGGTCCCCGGCAAGCTGCTGATCGTCGGCGCCGGCGTGATCGGCCTCGA
GCTTGGCTCGGTGTGGAAGCGCCTCGGCGCCGAAGTCGTCGTCGTCGAATTCCTCGACCGCATCCTGCCCGGCATGGACG
GCGAGATCGCCAAGCAATTCCAGCGCATCCTGGAAAAGCAGGGCTTTGCGTTCAAGCTGGGGGCCAAGGTCACCGCCGTC
GATACCTCGGGCAAGACGCTGAAGGCGACGATCGAGCCTGCTGCCGGCGGTGCCGCCGAGACGTTAGAGGCCGACGTCGT
GCTCGTCGCGATCGGCCGCGTGCCCTACACCGATGGTCTCGGCCTGAAGGAAGCGGGTGTCGCGCTCGACCCGCGTGGCC
GCGTGCAGATCGATCCGCATTTCGCCACCAGCGTGAAGGGCGTCTATGCCATTGGCGACGTCGTCGCGGGCCCGATGCTT
GCGCACAAGGCCGAGGATGAAGGCGTTGCGGTTGCTGAGATCATCGCAGGCCAGGCCGGCCACGTGAACTACGATGTTAT
CCCAGGCGTCGTGTATACCACGCCGGAAGTGTCCTCCGTCGGCAAGACCGAGGAGGAACTGAAGCAGGCCGGTGTGGCTT
ATACGGTCGGAAAGTTTCCCTTTACCGCCAACGGCCGTTCCAAGGTCAACCAGACCACCGACGGCTTTGTGAAGATTCTC
GCAGATGCGAAGACCGATCGTGTGCTCGGCGTGCACATTATCGGCCGCGAAGCTGGTGAAATGATCCATGAAGCGTGCGT
TCTCATGGAATTTGGCGGCAGTGCGGAGGATCTCGCGCGGACCTGCCACGCGCATCCGACCCGCTCGGAGGCCGTCAAGG
AAGCCGCGCTTGCAGTCGGCAAGCGGGCCATCCATATGTAG

Protein sequence :
MASYDLVVIGTGPGGYVCAVRAAQLGMKVAVVEKNATLGGTCLNVGCMPSKALLHASEMFEEAGHSFAKMGVSVSAPKLE
LPAMMNFKQQGIDGNVKGVEFLMKKNKIDVLKGTGKILGAGKVEVSADGKSQTIETKSIVIATGSDIARLKGIEIDEKRI
VSSTGALSLDKVPGKLLIVGAGVIGLELGSVWKRLGAEVVVVEFLDRILPGMDGEIAKQFQRILEKQGFAFKLGAKVTAV
DTSGKTLKATIEPAAGGAAETLEADVVLVAIGRVPYTDGLGLKEAGVALDPRGRVQIDPHFATSVKGVYAIGDVVAGPML
AHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTTPEVSSVGKTEEELKQAGVAYTVGKFPFTANGRSKVNQTTDGFVKIL
ADAKTDRVLGVHIIGREAGEMIHEACVLMEFGGSAEDLARTCHAHPTRSEAVKEAALAVGKRAIHM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 2e-71 41