Gene Information

Name : S23_29200 (S23_29200)
Accession : YP_005450240.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Resistance
Product : putative beta-lactamase precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3017333 - 3018151 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
GTGCTGACTCGCCGTTCCACCCTCGGCATTCTCGCCGCCGCTTCGATCCTGCCGCAGCGCTCGCTCGCCCACGTCGCGCC
GCCGCGAAACGAGATCCGCGACAGCCTGGCAAAGCGATTCACCGATCTCGGTACATCTGGCACCTTCGTCGGCTACAAGG
TCGAGGACTATCTGATCGTCGCCAGCGACAAGGAGCGCTCGGGTGAGGGCAAGCTGCCGGCCTCGACCTTCAAGATCCCG
AACTCGCTGATCGCGCTGGAGACCGGCGTCGTCTCCGATCCTGACAAGGACGTGTTTCCGTGGGACGGCGTGAAGCGTCC
GATCGAGGCCTGGAACAAGGATCACACGCTGCGCAGCGCCATCGCGGTGAGCGCGGTGCCGGTCTATCAGGAGATCGCGC
GCCGCATCGGCCAGGAGCGCATGCAGAAATATGTCGACCTGTTCGACTACGGCAACCGCGACATCGGCGGCGGCATCGAC
CAGTTCTGGCTCACGGGCGCCTTGCGCATCGATCCGATCGAGCAGATCGATTTCGTCGACCGGCTGCGCCGCCGCGCGCT
GCCGATTTCCAAGCGCAGCCAGGATCTGGTCGCCGACATCCTGCCGGTGACCAAGGTCGGCGAGAGTGTCATCCGCGCCA
AGTCGGGCCTGCTCGGCGCCGAGCGCGGCGAGCCGTCGCTCGGCTGGATGGTTGGCTGGGCCGAGAAGGGCGAGGCGCAC
ACCGTGTTCGCGCTCAATATGGATTGCACCGAGCCGCGCCTCGTCGGCGAGCGCATGCCGCTGACGCAAGCCTGCCTTGC
CGCGATCGGCGCGGTCTAA

Protein sequence :
MLTRRSTLGILAAASILPQRSLAHVAPPRNEIRDSLAKRFTDLGTSGTFVGYKVEDYLIVASDKERSGEGKLPASTFKIP
NSLIALETGVVSDPDKDVFPWDGVKRPIEAWNKDHTLRSAIAVSAVPVYQEIARRIGQERMQKYVDLFDYGNRDIGGGID
QFWLTGALRIDPIEQIDFVDRLRRRALPISKRSQDLVADILPVTKVGESVIRAKSGLLGAERGEPSLGWMVGWAEKGEAH
TVFALNMDCTEPRLVGERMPLTQACLAAIGAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bla OXA-10 CAJ77047.1 Oxacillinase Not tested AbaR1 Protein 5e-43 45
blaOXA-129 AET25386.1 OXA-129 beta-lactamase Not tested PAGI-2(C) Protein 3e-46 43
bla OXA-129 AFG30109.1 OXA-129 beta-lactamase Not tested PAGI-2 Protein 3e-46 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S23_29200 YP_005450240.1 putative beta-lactamase precursor NC_010410.6002874.p0 Protein 3e-43 45
S23_29200 YP_005450240.1 putative beta-lactamase precursor U37105.2.gene2.p01 Protein 3e-43 45
S23_29200 YP_005450240.1 putative beta-lactamase precursor AJ854182.1.gene1.p01 Protein 8e-43 44
S23_29200 YP_005450240.1 putative beta-lactamase precursor Z22590.1.gene1.p01 Protein 1e-42 44
S23_29200 YP_005450240.1 putative beta-lactamase precursor HM015773.1.gene6.p01 Protein 6e-42 43
S23_29200 YP_005450240.1 putative beta-lactamase precursor JN205800.1.gene6.p01 Protein 1e-41 43
S23_29200 YP_005450240.1 putative beta-lactamase precursor AM932669.1.gene2.p01 Protein 2e-46 43
S23_29200 YP_005450240.1 putative beta-lactamase precursor AY500137.1.gene1.p01 Protein 5e-42 42
S23_29200 YP_005450240.1 putative beta-lactamase precursor HQ700343.1.gene1.p01 Protein 3e-40 42
S23_29200 YP_005450240.1 putative beta-lactamase precursor X58272.1.gene1.p01 Protein 4e-46 42
S23_29200 YP_005450240.1 putative beta-lactamase precursor X75562.1.gene1.p01 Protein 1e-43 42
S23_29200 YP_005450240.1 putative beta-lactamase precursor AF231133.1.gene3.p01 Protein 5e-41 41
S23_29200 YP_005450240.1 putative beta-lactamase precursor AM412777.1.gene1.p01 Protein 1e-43 41
S23_29200 YP_005450240.1 putative beta-lactamase precursor U59183.1.gene3.p01 Protein 2e-43 41
S23_29200 YP_005450240.1 putative beta-lactamase precursor AY445080.1.gene1.p01 Protein 1e-43 41
S23_29200 YP_005450240.1 putative beta-lactamase precursor AY343493.1.gene1.p01 Protein 9e-38 41