Gene Information

Name : fliP (S23_24270)
Accession : YP_005449752.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2564503 - 2565258 bp
Length : 756 bp
Strand : -
Note : -

DNA sequence :
GTGAGGCTGCCGGCCCTCCCGCGTAGAGTTTTTCTTCTTTCTGTCCTGATCGGCGCGGCTTCGCTCGCGAGCCCTGCGCA
TGCGCAGGACATCAGCATCAATCTGGGCGGTCAGGGTGGCGGCGGCGTCACCGAGCGCGCGATCCAACTCATCGCCCTGC
TCACGGTGCTGTCAATCGCGCCGTCGATCCTGATCATGATGACGTCATTCACGCGCATCGTGGTCGTGCTGTCGCTGCTG
CGCACCGCGATGGGCACGGCGACCGCACCGCCAAACTCGGTGATCATCGCGCTCGCGATGTTCCTCACCTTCTTCGTGAT
GGGACCCGTCCTGCAGAAATCCTACGACGAGGGCATCCGTCCGCTCGTCGCCAACCAGATCAGCGTCGAGGATGCGCTGC
AGCGCGCCTCCGTCCCCTTGCGCGGCTTCATGCAGAAGAACGTGCGCGAGAAGGACCTCAAGCTGTTCCTGGACCTGTCC
CGCGAGCCGCCGCCGGCCACCCCCGACGACCTCGCGCTGCGCATCCTCGTCCCCGCCTTCATGATCTCGGAGCTGAAGCG
CGCCTTCGAGATCGGCTTCCTGCTGTTCCTGCCCTTCCTGATCATCGACCTCGTCGTGGCCTCCGTGCTGATGTCGATGG
GCATGATGATGCTGCCGCCAGCGACGATCTCGCTGCCGTTCAAGCTGATCTTCTTCGTGCTGGTCGACGGCTGGTCGCTG
GTGGCGGGGAGCCTTGTGCAGAGTTACGGGGGATAG

Protein sequence :
MRLPALPRRVFLLSVLIGAASLASPAHAQDISINLGGQGGGGVTERAIQLIALLTVLSIAPSILIMMTSFTRIVVVLSLL
RTAMGTATAPPNSVIIALAMFLTFFVMGPVLQKSYDEGIRPLVANQISVEDALQRASVPLRGFMQKNVREKDLKLFLDLS
REPPPATPDDLALRILVPAFMISELKRAFEIGFLLFLPFLIIDLVVASVLMSMGMMMLPPATISLPFKLIFFVLVDGWSL
VAGSLVQSYGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 9e-28 48
lscR AAO18040.1 LscR Virulence TTSS locus Protein 7e-27 45
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 3e-27 43
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 2e-27 43
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 3e-27 43
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 7e-27 42
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 7e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_005449752.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-49 58
fliP YP_005449752.1 flagellar biosynthesis protein FliP VFG2494 Protein 6e-52 57
fliP YP_005449752.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-46 53
fliP YP_005449752.1 flagellar biosynthesis protein FliP VFG2016 Protein 1e-41 51
fliP YP_005449752.1 flagellar biosynthesis protein FliP VFG0394 Protein 2e-28 45
fliP YP_005449752.1 flagellar biosynthesis protein FliP VFG0188 Protein 2e-30 45
fliP YP_005449752.1 flagellar biosynthesis protein FliP VFG0519 Protein 1e-27 43
fliP YP_005449752.1 flagellar biosynthesis protein FliP VFG0044 Protein 4e-25 41