Gene Information

Name : thiC (S23_16520)
Accession : YP_005448981.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1736712 - 1738610 bp
Length : 1899 bp
Strand : -
Note : -

DNA sequence :
ATGAACATCCGCTCCAATCCTGAAAAAACCGTCCCCGCCGTCACTACCGGCCCGCTGCCGTCCTCGCGAAAGATCTTCGC
CTCGCCCGACGCTGCGCCCGAGCTGCGCGTGCCCCTGCGCGAGATCATCCTCTCCGAAGGCGCGGGCGAGCCGAACCTGC
CGGTGTACGACACCTCGGGCCCCTACACCGATCCGTCCGTCACCATCGACGTCAACGCCGGCCTGCCGCGCGGTCGCAAA
GCCTGGGTGCTGGAGCGCGGCGGCGTCGAGGAGTATCAGGGCCGGCAGATCAAGCCGGAGGACAATGGCAGCGTCTCCGC
CGACAAGGCTGCGCGCGCGTTCAGTGCCTACCACCAGCCGCTGCGCGGCCTCGACGGCCACAAGATCACCCAGCTCGAAT
TCGCCCGCGCCGGCATCATCACCAAGGAGATGATCTACGTCGCCGCCCGCGAAAACCTCGGCCGCAAGCAGCAGCTGGAG
CGCGCGGAAGCAGCCCTCGCCGATGGCGAGAGTTTTGGCGCATCGGTCCCCGCCTTCATCACCCCGGAATTCGTGCGCAG
CGAAATCGCGCGCGGCCGCGCCATCATTCCCTGTAACATCAATCACAGCGAACTCGAGCCGATGATCATCGGCCGCAACT
TCCTCACCAAGATCAACGCCAATATCGGCAACTCCGCCGTGACGTCGTCGGTCGAGGAGGAGGTCGAGAAGATGGTGTGG
GCGATCCGCTGGGGCGCCGACACCGTGATGGACCTCTCCACCGGCCGCAACATCCACACCACGCGCGAATGGATCCTGCG
CAACTCGCCGGTGCCGATCGGCACCGTGCCGATCTACCAGGCGCTGGAGAAGTGCGACGGCGATCCGGTCAAGCTGACCT
GGGAGCTCTACAAGGACACGCTGATCGAGCAATGCGAGCAGGGCGTCGACTATTTCACCATCCACGCCGGCGTGCGCCTG
CAATACATCCACCTCACCGCCAGCCGCGTCACCGGCATCGTCAGCCGCGGCGGCTCGATCATGGCGAAGTGGTGCCTGGC
GCATCACAAGGAGAGCTTCCTCTACACCCATTTCGACGAGATCTGCGACCTCATGCGCAAGTATGACGTCTCGTTCTCGC
TCGGCGACGGATTGCGCCCGGGCTCGATCGCGGACGCCAACGACCGCGCGCAGTTCGCGGAGCTCGAGACGCTCGGTGAG
CTGACCAAGATCGCGTGGGACAAGGGCTGCCAGGTCATGATCGAAGGCCCCGGCCACGTGCCGATGCACAAGATCAAGAT
CAACATGGACAAGCAGCTCAAGGAGTGCGGCGAGGCGCCGTTCTACACGCTCGGGCCCCTGACCACCGACATCGCGCCGG
GCTACGACCACATCACCTCGGGCATCGGCGCCGCCATGATCGGCTGGTTCGGCTGCGCCATGCTCTGCTACGTCACCCCG
AAGGAGCATCTCGGCCTGCCCGATCGCAACGACGTCAAGGTCGGCGTCATCACCTACAAGATCGCTGCCCACGCAAGCGA
TCTCGCCAAGGGCCACCCCGCCGCGCAGCTCCGCGACGACGCCCTCTCCCGCGCCCGCTTCGACTTCCGCTGGAGCGACC
AGTTCAACCTCGGCCTCGACCCCGAGACCGCGAAAAACTTCCACGACGAGACCCTGCCGAAGGAAGCCCACAAGGTCGCG
CATTTCTGCTCGATGTGCGGCCCCAAATTCTGCTCGATGAAGATCACGCAGGACGTGCGCGACTACGCCGCCACGCTGAA
CGACCCGAACAGCATCGGCATGTCGCTGAGCGGCACGGCCGAGGACGGCATGAAGCAGATGAGCGCGAAGTTCAAGGAGA
TGGGCGAGAGCTTGTATCTGGATGCGGAGAAGGTGAAGGAGAGCAATCGGGTGTTGTGA

Protein sequence :
MNIRSNPEKTVPAVTTGPLPSSRKIFASPDAAPELRVPLREIILSEGAGEPNLPVYDTSGPYTDPSVTIDVNAGLPRGRK
AWVLERGGVEEYQGRQIKPEDNGSVSADKAARAFSAYHQPLRGLDGHKITQLEFARAGIITKEMIYVAARENLGRKQQLE
RAEAALADGESFGASVPAFITPEFVRSEIARGRAIIPCNINHSELEPMIIGRNFLTKINANIGNSAVTSSVEEEVEKMVW
AIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCDGDPVKLTWELYKDTLIEQCEQGVDYFTIHAGVRL
QYIHLTASRVTGIVSRGGSIMAKWCLAHHKESFLYTHFDEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGE
LTKIAWDKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP
KEHLGLPDRNDVKVGVITYKIAAHASDLAKGHPAAQLRDDALSRARFDFRWSDQFNLGLDPETAKNFHDETLPKEAHKVA
HFCSMCGPKFCSMKITQDVRDYAATLNDPNSIGMSLSGTAEDGMKQMSAKFKEMGESLYLDAEKVKESNRVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 66
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 66
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 63