Gene Information

Name : kdpB (S23_15340)
Accession : YP_005448863.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1610477 - 1612594 bp
Length : 2118 bp
Strand : +
Note : -

DNA sequence :
ATGGAATCTGTCCTCAAAGCCAACAAGCGCACGGCGGTTTCGGCGATGCTGGATCCGAAGATCGTGGTCCCCGCGATCGG
CGCGTCCTTCACCAAGCTCGATCCACGGCTGATGATCAAGAACCCCGTGATGTTCGTGGTCGAGATCGTGGCTGCGCTCA
CCACGGTGATCTTCCTGCGCGACCTCGTCACAGGTGGTGAGCACCTCGGCTTTACCTTCCAGATCATCCTCTGGCTGTGG
TTTACCGTCCTGTTCGCCAATTTCGCCGAAGCGGTCGCCGAGGGCCGTGGCAAGGCGCAGGCGGAATCGCTACGCAAGAC
CCGCACCGAGAGCCAGGCCAAGCTGCTAACCGGTGCGGGCCAGCCCTTCAAGCTGGTGCCGGGCACGAGCTTGAAGGTCG
GCGACATCGTGCTGGTCGAGGCCGGCGATACCATCCCCTCCGATGGCGAAGTGATCGAGGGGGTCGCCTCGGTCAACGAG
GCCGCCATCACCGGCGAATCCGCTCCCGTCATTCGCGAGTCCGGCGGCGACCGTTCGGCCGTGACGGGCGGCACCCAGGT
GCTTTCCGACTGGATCCGCGTTCGTATCACGGCGGCGCAGGGCTCGACCTTCATCGACCGCATGATCAAGCTGGTCGAGG
GCGCCGAGCGTGCGAAGACGCCGAACGAGATCGCGCTCAACATCCTGCTGGCCGGCCTCACCATCATCTTCGTGTTCGCC
ACCGTCACGATTCCAAGCTATGCCGCCTATGCCGGCGGCTCGATCTCGGTGATCGTGCTGGTCGCGCTGTTCGTGACGCT
GATCCCGACCACGATCGGTGCGCTGCTCTCTGCCATCGGCATCGCCGGCATGGATCGCCTGGTGCGCTTCAACGTGCTGG
CGATGTCCGGCCGAGCGGTGGAAGCCGCCGGCGACGTCGATACGCTGCTGCTGGACAAGACCGGCACCATCACCCTCGGC
AACCGGCAAGCAACAGCGTTCCGTCCCGTGCGCGGTGTCACCGAGCAGGAGCTGGCGGATGCAGCCCAGCTTGCCTCGCT
GGCCGACGAGACGCCGGAAGGGCGCTCCATCGTCGTGCTGGCGAAGGAGAAGTATGGCATCCGCGGCCGCGACATGGCCG
AGCTTGGCGCCACCTTCATTCCGTTCACGGCGCAAACCCGCATGAGCGGCGTCGATGCCGGCGGCTCGTCGGTGCGCAAG
GGCGCGGTCGATGCCATGCTCAGCTATATCGGTGGCGGTGCGACGCTGGCGGTTGCCTCCGGTAATACCGCCCGTGCCCT
CCAGTCCACGGCGTTGTCCGACGTCGGCCGCGAGGTGCAGACCATCGCCGACGAAATCGCCAAGGCCGGCGGAACGCCGC
TTGCGGTCGCGAAGGACGGCAAGCTGCTCGGCGTCATCCAGCTCAAGGACATCGTCAAGGGCGGGATCCGCGAGCGCTTC
GCCGAGCTGCGCCGCATGGGCATCCGCACCGTCATGATCACCGGCGACAACCCGATGACGGCGGCCGCGATTGCGGCGGA
GGCCGGCGTGGATGATTTCCTGGCGCAGGCAACGCCCGAGGACAAGCTCAAGCTGATTCGCGACGAGCAAGCCAAGGGCA
AGCTTGTGGCGATGTGCGGCGACGGCACCAACGACGCGCCGGCGCTCGCGCAGGCTGACGTCGGCGTCGCCATGAACACC
GGCACCCAGGCCGCCCGCGAGGCCGGCAACATGGTCGACCTCGATTCCAATCCGACCAAGCTGATCGAGGTGGTCGAGAT
CGGCAAGCAGCTCCTGATGACGCGCGGCGCGCTGACGACCTTCTCGATCGCCAACGACGTCGCAAAGTACTTTGCGATCA
TCCCCGCAATGTTCCTGGCGTTCTACCCCCAGCTCAACGTGCTCAACGTCATGAACCTGTCGAGCCCGCAAAGCGCCATC
CTGTCGGCGATCATCTTCAACGCGCTGATCATCATCGGGCTGATTCCGCTGGCGCTGAAGGGCGTCGCCTACCGTGCCGT
CGGTGCCGGTGCATTGCTGCGCCGTAACCTGCTGATCTACGGCCTCGGCGGCATCGTCATTCCGTTCGTCGGCATCAAGG
CGATCGACCTCGTCGTTGTCGCTCTGCACCTGGCCTAA

Protein sequence :
MESVLKANKRTAVSAMLDPKIVVPAIGASFTKLDPRLMIKNPVMFVVEIVAALTTVIFLRDLVTGGEHLGFTFQIILWLW
FTVLFANFAEAVAEGRGKAQAESLRKTRTESQAKLLTGAGQPFKLVPGTSLKVGDIVLVEAGDTIPSDGEVIEGVASVNE
AAITGESAPVIRESGGDRSAVTGGTQVLSDWIRVRITAAQGSTFIDRMIKLVEGAERAKTPNEIALNILLAGLTIIFVFA
TVTIPSYAAYAGGSISVIVLVALFVTLIPTTIGALLSAIGIAGMDRLVRFNVLAMSGRAVEAAGDVDTLLLDKTGTITLG
NRQATAFRPVRGVTEQELADAAQLASLADETPEGRSIVVLAKEKYGIRGRDMAELGATFIPFTAQTRMSGVDAGGSSVRK
GAVDAMLSYIGGGATLAVASGNTARALQSTALSDVGREVQTIADEIAKAGGTPLAVAKDGKLLGVIQLKDIVKGGIRERF
AELRRMGIRTVMITGDNPMTAAAIAAEAGVDDFLAQATPEDKLKLIRDEQAKGKLVAMCGDGTNDAPALAQADVGVAMNT
GTQAAREAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFLAFYPQLNVLNVMNLSSPQSAI
LSAIIFNALIIIGLIPLALKGVAYRAVGAGALLRRNLLIYGLGGIVIPFVGIKAIDLVVVALHLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-166 60
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 3e-166 60
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-142 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-140 54
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-140 54
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-140 54
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-140 54
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 9e-141 54