Gene Information

Name : S23_11340 (S23_11340)
Accession : YP_005448464.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1201957 - 1202991 bp
Length : 1035 bp
Strand : +
Note : -

DNA sequence :
ATGGCCTATCTCGAGCTCGATCGGGTCGCCAAGCAGTTCGGCGCGCAGACCGTGGTCGACGACTTCAGCCTGTCGGTGGG
GAAGGGGGAGTTCATCTCCTTTCTCGGCCCGTCCGGCTGCGGCAAGACCACGACGCTGCAGATGATCGCGGGTTTCCTCG
ACCCCACGCGCGGCGCGATCCTCCTGGAGGGCAAGGATCTGGCCGCGATCCATCCGGCCAAGCGCGGGCTCGGCATCGTG
TTCCAGAGCTACGCGCTGTTTCCGCACATGACCGCGGCGGAAAACGTCGCCTTTGGTCTGGAGATGCGCAAGGTGACGCG
CAGTGAGCGGGCCGAACGTGTTCGCGCCGCGCTCGCGATGGTCGGGCTCGCCGGCTACGAGGACCGCCATCCCCGTCGCA
TGTCCGGCGGCCAGCAGCAGCGCGTGGCGCTGGCGCGGGCGCTGGTGATCAAGCCGAGCGTGCTGCTGCTCGACGAGCCG
CTGTCCAACCTCGACGCCAAGCTGCGCGAGGAGATGCAGATCGAGCTGCGCCAGATCCAGCGCACCATCGGCACCACCAC
GATTCTCGTCACCCACGACCAGAACGAGGCGATGTCGCTATCCGATCGGATCGTGGTGATGAGCCAAGGCAAGATCGAGC
AGATCGGCACGCCACAGGAGACCTATGAGCGGCCGGCTTCGGCCTTCGTCTCGCAGTTCTTGGGCAAGACCAACGATTTT
GCCGCGACGATCGATCGGACCGCCGCGCAAGCGCGGGTGACGGCAGGCTCCTGGAGCGCGCCGGCGCCGGCTGGGCTCGG
CGGCCCTGTCACCGTCAGCGTTCGCCCCGAAAGAATCGGCTTTGGCGATGCCGGCCTCAGCGCAAAAATCAACACGCGCA
TCTTCCAGGGCAATCACTGGCTGTTCCAGTGCGACAGCGAATGCGGCCCGGCGATCGTGATCCGCCAGAACGATGGTACC
GCGCAGCCAGCCGAAGGCGATGCGGTTCGCCTCACCTGGCGTCCTGAGGACATGAGCGTCAGGGGCGTCGCATGA

Protein sequence :
MAYLELDRVAKQFGAQTVVDDFSLSVGKGEFISFLGPSGCGKTTTLQMIAGFLDPTRGAILLEGKDLAAIHPAKRGLGIV
FQSYALFPHMTAAENVAFGLEMRKVTRSERAERVRAALAMVGLAGYEDRHPRRMSGGQQQRVALARALVIKPSVLLLDEP
LSNLDAKLREEMQIELRQIQRTIGTTTILVTHDQNEAMSLSDRIVVMSQGKIEQIGTPQETYERPASAFVSQFLGKTNDF
AATIDRTAAQARVTAGSWSAPAPAGLGGPVTVSVRPERIGFGDAGLSAKINTRIFQGNHWLFQCDSECGPAIVIRQNDGT
AQPAEGDAVRLTWRPEDMSVRGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-36 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S23_11340 YP_005448464.1 ABC transporter ATP-binding protein BAC0604 Protein 6e-43 44