Gene Information

Name : ureC (S23_10210)
Accession : YP_005448352.1
Strain : Bradyrhizobium sp. S23321
Genome accession: NC_017082
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1081830 - 1083545 bp
Length : 1716 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGTCAAGATCAAACGTTCCGTCTATGCCGACATGTTCGGCCCGACCACCGGCGACAGGGTGCGGCTCGCCGACAC
CGATCTCATCATCGAGGTCGAGAAGGATTTCACCACCTATGGCGAAGAGGTGAAGTTCGGCGGCGGCAAGGTGATCCGCG
ACGGCATGGGGCAGTCGCAGGTCACCAACAAACAAGGCGCGGCTGACACCGTCATCACCAATGCGCTGATCGTCGATCAC
TGGGGCATCGTGAAGGCCGATGTCGCCATCAAGGACGGCATGATTTCGGCCATCGGCAAGGCCGGCAATCCCGACATCCA
GCCGGGCGTCACCATCATCATCGGGCCCGGCACCGACGTGATCGCGGGCGAAGGCAAGATCCTCACCGCCGGCGGCTTCG
ACAGCCACATCCATTTTATCTGTCCGCAGCAGATCGAGCACGCGCTGATGTCTGGCGTCACCTCGATGCTCGGGGGCGGC
ACCGGCCCGTCGCACGGCACCTTCGCCACCACCTGCACGCCGGGGCCGTGGCACATGGGGCGGATGATCCAGTCGTTCGA
CGCTTTCCCGGTCAATCTCGGCATCTCCGGCAAGGGCAACGCCTCGCGGCCCGCCGCGCTGGTCGAGATGATCAAGGCCG
GCGCCTGCGCGCTGAAGCTGCACGAGGACTGGGGCACGACGCCGGCTGCGATCGACAACTGCCTGTCGGTGGCCGACGAT
TACGACATCCAGGTGATGATCCACACCGACACGCTGAACGAGTCCGGCTTCGTCGAGGATACGATCAAGGCCTTCAAGGG
CCGCACCATCCACGCCTTCCACACCGAGGGCGCCGGCGGTGGGCATGCCCCTGATATCATCAAGGTCGCAGGGCTCAAGA
ACGTGCTGCCGTCCTCGACCAATCCGACGCGCCCCTTCACGCGCAACACGATCGACGAGCATCTGGACATGCTGATGGTG
TGCCACCATCTCGATCCCTCGATCGCGGAGGACCTGGCGTTCGCCGAGAGCCGCATCCGCAAGGAGACCATCGCGGCCGA
GGACATCCTGCACGATCTCGGTGCGCTCTCGATGATGTCGTCGGATTCCCAGGCCATGGGCCGCCTCGGCGAGGTGATCA
TCCGGACATGGCAGACCGCGGACAAGATGAAGAAGCAGCGCGGGTCGCTGCCGCAGGACAAGGGCAAGGACAACGACAAT
TTCCGCGTCAAGCGCTACATCGCCAAATACACCATCAATCCCGCGATCGCGCACGGCGTGTCGAAGCTGATCGGCTCCGT
GGAGAAAGGCAAGCTTGCCGATCTCGTGCTGTGGTCGCCGGCCTTCTTCGGCGTCAAGCCGGACTGCATCGTCAAGGGTG
GTATGATCGTCGCGGCTCCGATGGGCGATCCCAACGCCTCGATCCCGACGCCGCAGCCGGTGCATTACCAGCCGATGTTC
GGCGCCTTCGGCAGGGCGCGGACGGCGTCGTCCGTGGTGTTCACGTCGAAGGCCGCGATCACCGGCGGGCTCGCGCGCAA
GCTCGGCATCGAGAAGAAGCTCTACGCGGTCCAGAATACCCGCGGCAGGATCTCCAAGAAGAGCATGATCCACAACGACG
CGACGCCCAATATCGAGGTCGATCCGGAGACCTATGAGGTCCGCGCCGACGGCGAATTGCTCACTTGCGCTCCGGCCGAG
GTGCTGCCGATGGCGCAGCGATATTTCATGTACTGA

Protein sequence :
MSVKIKRSVYADMFGPTTGDRVRLADTDLIIEVEKDFTTYGEEVKFGGGKVIRDGMGQSQVTNKQGAADTVITNALIVDH
WGIVKADVAIKDGMISAIGKAGNPDIQPGVTIIIGPGTDVIAGEGKILTAGGFDSHIHFICPQQIEHALMSGVTSMLGGG
TGPSHGTFATTCTPGPWHMGRMIQSFDAFPVNLGISGKGNASRPAALVEMIKAGACALKLHEDWGTTPAAIDNCLSVADD
YDIQVMIHTDTLNESGFVEDTIKAFKGRTIHAFHTEGAGGGHAPDIIKVAGLKNVLPSSTNPTRPFTRNTIDEHLDMLMV
CHHLDPSIAEDLAFAESRIRKETIAAEDILHDLGALSMMSSDSQAMGRLGEVIIRTWQTADKMKKQRGSLPQDKGKDNDN
FRVKRYIAKYTINPAIAHGVSKLIGSVEKGKLADLVLWSPAFFGVKPDCIVKGGMIVAAPMGDPNASIPTPQPVHYQPMF
GAFGRARTASSVVFTSKAAITGGLARKLGIEKKLYAVQNTRGRISKKSMIHNDATPNIEVDPETYEVRADGELLTCAPAE
VLPMAQRYFMY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 0.0 68
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 0.0 68
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-163 61
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 5e-163 61
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-163 61
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-163 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_005448352.1 urease subunit alpha VFG0270 Protein 4e-160 62