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Name : clpC (PSMK_03880) Accession : YP_005444444.1 Strain : Phycisphaera mikurensis NBRC 102666 Genome accession: NC_017080 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 421635 - 424268 bp Length : 2634 bp Strand : + Note : - DNA sequence : ATGTTCGAACGATTCACCGACCGCGCCCGAAAGGTCATGGCCCTGGCCAACCAGGAGGCGCAACGCTTCAATCACGAGTA CATCGGCACCGAGCACGTCCTGCTCGGGCTGGTCAAAGAGGGCTCCGGCGTCGGGGCCAACGTGCTCAAGAACCTCGACG TCGACCTCCGCCGCGTGCGGCTCGAGGTCGAGAAGCTCGTCAAGAGCGGCCCGGACATGGTCACCATGGGCAAGCTGCCC CAGACCCCGCGCGCCAAGAAGGTGATCGAGTACTCGATCGAGGAGGCCCGGAACCTCAACCACAACTACGTCGGCACCGA GCACCTGCTGCTGGGCCTGCTGCGCGAGCACGAGGGCGTCGCCGCCCAGGTGCTGATGAACCTCGGTCTCAAGCTCGACG AGGTCCGCGAGGAGGTGCTGAACCTGCTCGGGGCCGGCGTCGATCCCGAAGAGGCCACCGGCGAAGACGGCGACGAAGGC GTCACCTCCGGCGGCGGCGGCGGCTCGGGCCGCCCGGGCAAGGGGGCCAAGGGCAAGAGCAAGACGCCCGCCCTGGACAG CTTCGGCCGCGACCTCACCGAGCTGGCCAAGGAGGACACGCTGGACCCCGTCATCGGCCGAGCCGAGGAGATCGAGCGGC TCATCCAGATCCTGTGCCGTCGCACCAAGAACAACCCCGTCCTCCTGGGCGAGGCGGGCGTGGGCAAGACCGCGATCGTC GAGGGCCTGGCCCAGAAGATCAACGACCAGGAGGTGCCCGAGATCCTGCTGGACCGCCGGATCGTCGTGCTCGACCTGGC GATGATGGTCGCCGGCACGAAGTACCGCGGCCAGTTCGAGGAGCGGATCAAGGCCGTGATGAACGAGGTCCGCCGCGCCA AGAACGTGCTGCTGTTCATCGACGAGCTGCACACGCTGGTGGGCGCCGGCGGCGCCGAGGGCGCGATCGACGCCTCCAAC GTGCTCAAGCCCGCGCTCAGCCGCGGCGAGATCCAGTGCGTCGGGGCCACCACGCTCGACGAGTACCGCAAGTACATCGA GAAGGACGGCGCGCTGGAGCGTCGCTTCCAGACGATCATGGTCGAGCCGCCCAACAAGGCGGACACGGTGGAGATCCTCA AGGGCATCCGCCCGAAGTACGAGGAGCACCACCGCGTGCAGATCACCGACGAGGCGCTCGTGACGGCGGTCGAGTACTCC AACCGCTACATCCAGGCCCGCGTGCAGCCCGACAAGTCGATCGACGTCATCGACGAGGCGGGGGCGCGGATCCGGCTGAA GTCGATGAGCAAGCCCCCGAACCTCTCCGAGCTCGAGGAGAAGATCGAGCGGCTGTCGATCGAGAAGGACGAGGCCGTGA AGGCCGCGGACTACGAGAAAGCGGCCGAGCTGCGCGACCAGGCCGAGAACCTGAAGCGCGAGAAGGAGCAGATCCAGAAG GACTGGCGCGAGCGGGCCAAGGAGGTCGACGGCGTGGTCGACAAGGAGGTCATCGCCGAGGTGGTTTCCAAGATGACCGG CGTGCCGCTCACCCGGCTCGAGAAGGCCGAGACCCAGCGCCTCCTCCAGCTCGAGGACGAGCTGCACAAGACCGTCGTCA GCCAGGACGAGGCGATCAAGACCGTCAGCCGCGCCATCCGTCGCGCCCGCTCGGGGCTCAAGGACCCGCGTCGGCCGATG GGCTCGTTCATCTTCATCGGCCCCTCGGGCGTGGGCAAGACGCTGCTTTCCAAGGCGCTCGCGGAGTTCATGTTCGGCGA CGCCGACGCGCTGATCCGCATCGACATGTCCGAGTACATGGAGAAGCACAACGTGTCGCGCCTCATCGGTGCGCCTCCCG GCTACGTCGGCTACGAGGAGGGCGGCCAGCTCACCGAGCAGATCCGCCGCCGGCCGTACGCCGTGGTGCTGCTCGACGAG ATCGAGAAGGCCCACCCCGACGTCTTCAACACGCTGCTGCAGGTGATGGAAGAAGGACAGCTGACCGACTCGTTCGGCCG CCACGTCGACTTCCGCAACGTCATCTTGATCATGACCAGCAACATCGGCGCCGACCTCATCAAGAACAAGGCGAGCTTCG GCTTCCAGAAGCGCGACGAGAACGTCGACTACGACAAGATGAAGACGACGCTCCAGGGCGAGGTCGAGCGCTACTTCCGC CCCGAGTTCATCAACCGCCTCGACGAGCTGATCGTCTTCAAGCCGCTGAACAAGGGCAACCTGACGGGCATCGTCGAGTA CGAGCTCAAGAAGGTGTTCTCGCGGCTCGACGAGCGGAACATGGCCCTCAAGGTGGACCCGCCGGCGAAGGAGTTCCTCA TCGACAAGGGCTACAACCCCGACTTCGGCGCCCGGCCGCTGCGTCGCGCGATCGAGCAGTACGTCGAGGATCCGCTCTCC GATGGCATCCTCCGCGAGGAGTTCGGCGAGAACCAGATCATCACGGTCACCCGCGAGGAGGGCAAGGACCACCTGTCCTT CTCGGCGGAGGCCATGCCCAGCGAGGTGATCGAGGCCGCCGAGAACGACGAGCCGGTGGCCGCGATGATCGACGCCGACG CGGGGCTCGGCGCCGAGGAGCCCGGCGAGGACGCCGAGCCCACGGACGAGCACTCGCCCGACGAATCGGCCTGA Protein sequence : MFERFTDRARKVMALANQEAQRFNHEYIGTEHVLLGLVKEGSGVGANVLKNLDVDLRRVRLEVEKLVKSGPDMVTMGKLP QTPRAKKVIEYSIEEARNLNHNYVGTEHLLLGLLREHEGVAAQVLMNLGLKLDEVREEVLNLLGAGVDPEEATGEDGDEG VTSGGGGGSGRPGKGAKGKSKTPALDSFGRDLTELAKEDTLDPVIGRAEEIERLIQILCRRTKNNPVLLGEAGVGKTAIV EGLAQKINDQEVPEILLDRRIVVLDLAMMVAGTKYRGQFEERIKAVMNEVRRAKNVLLFIDELHTLVGAGGAEGAIDASN VLKPALSRGEIQCVGATTLDEYRKYIEKDGALERRFQTIMVEPPNKADTVEILKGIRPKYEEHHRVQITDEALVTAVEYS NRYIQARVQPDKSIDVIDEAGARIRLKSMSKPPNLSELEEKIERLSIEKDEAVKAADYEKAAELRDQAENLKREKEQIQK DWRERAKEVDGVVDKEVIAEVVSKMTGVPLTRLEKAETQRLLQLEDELHKTVVSQDEAIKTVSRAIRRARSGLKDPRRPM GSFIFIGPSGVGKTLLSKALAEFMFGDADALIRIDMSEYMEKHNVSRLIGAPPGYVGYEEGGQLTEQIRRRPYAVVLLDE IEKAHPDVFNTLLQVMEEGQLTDSFGRHVDFRNVILIMTSNIGADLIKNKASFGFQKRDENVDYDKMKTTLQGEVERYFR PEFINRLDELIVFKPLNKGNLTGIVEYELKKVFSRLDERNMALKVDPPAKEFLIDKGYNPDFGARPLRRAIEQYVEDPLS DGILREEFGENQIITVTREEGKDHLSFSAEAMPSEVIEAAENDEPVAAMIDADAGLGAEEPGEDAEPTDEHSPDESA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005444444.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 56 |
| clpC | YP_005444444.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 1e-154 | 51 |
