|
Name : PSMK_30940 (PSMK_30940) Accession : YP_005447150.1 Strain : Phycisphaera mikurensis NBRC 102666 Genome accession: NC_017080 Putative virulence/resistance : Virulence Product : iron ABC transporter permease protein Function : - COG functional category : - COG ID : - EC number : - Position : 3669255 - 3670118 bp Length : 864 bp Strand : + Note : - DNA sequence : TTGAGCGTCGCGTACCTGCTCGAACCGTTCCAGTACGGCTTCATGAAGGAAGCCATGCTCATGGCCGCGCTCATCGGCGC GACCTGCGCCCTGCTCAGCTGCTACCTGGTGCTCAAGGGCTGGTCGCTGATGGGCGACGCGGTCAGCCACGCCGTGCTGC CGGGCATCGTGCTCGCGTACGTCGTCGGCCTCCCGCTGGGCGTCGGGGCCTTCTTCGCCGGCGTGCTGTGCGCCGGGAGC ACCGGCTGGATCAAGAACCACAGCCGCGTCAAGGAAGACACCGTGATGGGCGTCGTCTTCACCGGGCTCTTCGCGCTGGG CCTGGTGATGTACTCCAAGATCCAGAGCGACATCCACCTGAACCACGTCCTCTTCGGCAGCCTGCTGGGCATCGAGACCG GCGACATGATCCAGGCCGTCGTCGCGTCGGGCCTGACGCTCGCCGCGGTCGCCATCTTCCGCAAAGACCTTCTGCTGTAC CTCTTCGACGCGAATCAGGCCCGGGCCGTGGGCCTGAACCCGACCTTCCTGCACTACCTGTTGCTGTCGATCCTCTCGCT GACGATCGTCGCCTCGCTGCAGGCCGTGGGCATCATCCTCACCGTCGCGATGCTCATCGTGCCCGGTTGCATCGGCCAGC TGCTCGCCGACCGCTTCGGCCGGATGCTCGGGATCGCCTCGGCCGCCGCGGTTTTCTCCGCCGTCGCGGGGACGTACGCC AGCTACTTCCTCAACGGCGAGACGGGCGCCTGCATCGTGCTGGTGCAGGCGCTGATCCTCCTGCTCGCGGTCTTGTTCGC CCCCAAGCACGGCGTGCTCTCCCGCGCCCGCACCACACGCCGGGCGACCGCGTCGGCGGCCTGA Protein sequence : MSVAYLLEPFQYGFMKEAMLMAALIGATCALLSCYLVLKGWSLMGDAVSHAVLPGIVLAYVVGLPLGVGAFFAGVLCAGS TGWIKNHSRVKEDTVMGVVFTGLFALGLVMYSKIQSDIHLNHVLFGSLLGIETGDMIQAVVASGLTLAAVAIFRKDLLLY LFDANQARAVGLNPTFLHYLLLSILSLTIVASLQAVGIILTVAMLIVPGCIGQLLADRFGRMLGIASAAAVFSAVAGTYA SYFLNGETGACIVLVQALILLLAVLFAPKHGVLSRARTTRRATASAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 7e-56 | 54 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 6e-56 | 54 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 6e-56 | 54 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 6e-56 | 54 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 5e-56 | 54 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 5e-43 | 42 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 5e-43 | 42 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 5e-43 | 42 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 7e-43 | 42 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 7e-43 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSMK_30940 | YP_005447150.1 | iron ABC transporter permease protein | BAC0442 | Protein | 3e-54 | 57 |
| PSMK_30940 | YP_005447150.1 | iron ABC transporter permease protein | BAC0352 | Protein | 3e-56 | 54 |
| PSMK_30940 | YP_005447150.1 | iron ABC transporter permease protein | BAC0441 | Protein | 4e-43 | 44 |
| PSMK_30940 | YP_005447150.1 | iron ABC transporter permease protein | BAC0351 | Protein | 3e-43 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSMK_30940 | YP_005447150.1 | iron ABC transporter permease protein | VFG0528 | Protein | 3e-56 | 54 |
| PSMK_30940 | YP_005447150.1 | iron ABC transporter permease protein | VFG0527 | Protein | 3e-43 | 42 |
