|
Name : thiC (PSMK_29680) Accession : YP_005447024.1 Strain : Phycisphaera mikurensis NBRC 102666 Genome accession: NC_017080 Putative virulence/resistance : Unknown Product : phosphomethylpyrimidine synthase Function : - COG functional category : - COG ID : - EC number : - Position : 3518145 - 3519854 bp Length : 1710 bp Strand : - Note : protein synonym:hydroxymethylpyrimidine phosphate synthase; protein synonym:thiamine biosynthesis protein ThiC DNA sequence : ATGCCGCCGCTGCCGCAGAAGACCGCCTGGGACTTCATGCCCGCCGGCTGGACGTGCACCGACGAGGCGAACCGGGCCGA CGCCGCTTCGTGGCGAGCCCCCGACGGCTTCGAGGCGTCGACCCAGCTCGAGCACGCGCGCCTCGGCACGATCACGAAGC AGATGGAGCGCGTCGCCGAGCGGGAGCCGCACCTCAGCGCGGCCCAGGTCCGCGACGAGGTCGCCGCCGGCCGCATGGTG ATCCCGGCGAACAAGAACCACCTGAAGACCTCGCTGGACCCGATGGCCATCGGCCGGGCCAGCAAGACGAAGGTCAACGC GAACATGGGCGCCAGCCCGGTCTCCTCCTCGATCGACGAGGAGGTCGACAAGCTCCGCTGGGCGGAGAAGTGGGGCGCCG ACACGGTGATGGACCTCTCCACCGGCGGCGACCTGGACGCCACCCGCGTCGCGATGACGACGCACTCGACGGTGCCCATC GGCACCGTGCCGATCTACTCGATGATCATCGGGCGGAAGATCGAAGACCTCGACGAGGAGATCATCCTCGACGGCATCCG CGCCCAGGCCGAGCAGGGCGTGGACTACATGACGGTCCACGCCGGGATCCTCAAGTCGCACCTGCCGCTGGTGAAGAAGC GGCTGATCGGCCTGGTCTCCCGCGGCGGCTCGCTGCTGGCGAAGTGGATGCTGGTCCACCAGAGAGAGAACCCGATGAAC ACGTCGTGGGAGAAGATCTGCGGGGTCCTCCGCGAGCACGACGTGACCTTCAGCATCGGCGACGGCTGCCGCCCCGGCGG CCTCGCCGACGCCACCGACGAGCTGCAGCTGGCCGAGCTGGTCGAGCTGGGCAAGCTGACCGAGCGTGCCTGGCGCTGCG GCGTGCAGGTGATGGTCGAGGGCCCCGGCCACGTGCCGCTGGACCAGATCGAGTTCAACATGAAGGCCCAGCGGCACCTC TGCCACGGGGCGCCCTTCTACGTGCTCGGGCCCCTGGTGACCGACATGTTCCCCGGCTACGACCACATCACCAGCTGCAT CGGGGCGACCTCGGCCGGCTACCACGGGGCGTCGATGCTGTGCTACGTCACGCCCAAGGAGCACCTGGGCCTGCCCAAGA AGGACGACGTGAAGCAGGGCTGCGTGGCGTACAAGATCGCGGCTCACGCCGCCGACGTGGCGCTGGGGATCCCCGGCACC CGGGACAACGACGACGAGCTGACCAAGGCCCGGGCGGCCCTCAACTGGCAGAAACACTTCGACCTGTCCTTCGACCCGGA CCTGGCCCGGGCGTACCACGACGAGGACCTCGACGTGGACACCGACTTCTGCGCGATGTGCGGCCACGACTGGTGCAGCG TCCGCATCAGCAAGGAGATCTCCGAGTGGGACTCGGGCCTCGCCGAGGGCTTCGACCGCGGGCGGACGGTGAAGAGCGCC GCGCTCAACGAGGAGCAGCGGCGGATCCTCGAGCAGCGCGGCAACCTCTCGCCGGCGGAGATCCACAAGCTCGCGGCGAA GGCCAAGGGCAAGCTGGTGCCCGCGGACGAGGACGGCCGGGCGCGCTGCCACAGCGACCACGTCGGGGACGACGAAGCGG CGAAGAGCGTGGCGCCGAAGGAGGCGGCCGCCCTCGCCAACGGCGACCGGTTGGTCCAGCTCGACACCAGCGAGGCGCAC GGGCTCTCGAAAGCCGACTCGGTCATCTGA Protein sequence : MPPLPQKTAWDFMPAGWTCTDEANRADAASWRAPDGFEASTQLEHARLGTITKQMERVAEREPHLSAAQVRDEVAAGRMV IPANKNHLKTSLDPMAIGRASKTKVNANMGASPVSSSIDEEVDKLRWAEKWGADTVMDLSTGGDLDATRVAMTTHSTVPI GTVPIYSMIIGRKIEDLDEEIILDGIRAQAEQGVDYMTVHAGILKSHLPLVKKRLIGLVSRGGSLLAKWMLVHQRENPMN TSWEKICGVLREHDVTFSIGDGCRPGGLADATDELQLAELVELGKLTERAWRCGVQVMVEGPGHVPLDQIEFNMKAQRHL CHGAPFYVLGPLVTDMFPGYDHITSCIGATSAGYHGASMLCYVTPKEHLGLPKKDDVKQGCVAYKIAAHAADVALGIPGT RDNDDELTKARAALNWQKHFDLSFDPDLARAYHDEDLDVDTDFCAMCGHDWCSVRISKEISEWDSGLAEGFDRGRTVKSA ALNEEQRRILEQRGNLSPAEIHKLAAKAKGKLVPADEDGRARCHSDHVGDDEAAKSVAPKEAAALANGDRLVQLDTSEAH GLSKADSVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 4e-102 | 50 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 4e-102 | 50 |
