Gene Information

Name : PSMK_27990 (PSMK_27990)
Accession : YP_005446855.1
Strain : Phycisphaera mikurensis NBRC 102666
Genome accession: NC_017080
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3338304 - 3339026 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
TTGCCCCCCCTCCTCCACATCTCGGGCGTCACGAAGCGGTACCGGCAGGGGCGCGGCCGGTACGTGGACGCCCTGCGGGG
CGTCGACCTGGAGGTGCCCCGCGGCGAGTTCCTCGCGATCATGGGCCCTTCGGGCTCGGGCAAGTCGACGCTGTTCAACC
TCATCGGCGCACTGGACAAGCCCACCGCGGGCGAGGTGACGCTCGGCGGGTTGGCGCTCCCGCGGCTGCGGCCGCGGCAG
CTTGCGTACGTGCGCTGCCGGCACATCGGCTACGTCTTCCAGGCGTACAACCTGGTGGCCTCGCTGTCGGCGCTCAAGAA
CGTGGCGCTGCCGGCGGTGTTCGGCGGAGCCGGCGTCGACGAGGCCGACGCGCTGGCGCGGGCCCAGCTCGACGCCGTCG
GGCTGGGGCACCGGCTCGACCACCGCCCCGACCAGCTCTCCGGCGGGCAGCAGCAGCGGGTGGCGATCGCGCGGGCCCTC
GTCAACGCCCCCGCCCTGCTGCTGGCGGACGAGCCGACGGCGAACCTCGACCACCGGACCGGGTCGGAGGTGATCGACCT
CTTCCGCGAGCTCGGCGCGGCGCGGGGCATGACGGTCGTCACGACGACGCACGACCACCAGATGCTGCAGCGCAGCGACC
GGGTCGTGTGGATCCGCGATGGGCAGAAGGTGCGCGAGGCGTCGTCGGCGGAGCTGGAGATCACGACCGGCGAGGTGGGC
TGA

Protein sequence : 
MPPLLHISGVTKRYRQGRGRYVDALRGVDLEVPRGEFLAIMGPSGSGKSTLFNLIGALDKPTAGEVTLGGLALPRLRPRQ
LAYVRCRHIGYVFQAYNLVASLSALKNVALPAVFGGAGVDEADALARAQLDAVGLGHRLDHRPDQLSGGQQQRVAIARAL
VNAPALLLADEPTANLDHRTGSEVIDLFRELGAARGMTVVTTTHDHQMLQRSDRVVWIRDGQKVREASSAELEITTGEVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSMK_27990 YP_005446855.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-34 48
PSMK_27990 YP_005446855.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-39 47
PSMK_27990 YP_005446855.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-34 43