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Name : hsdR (PSMK_27940) Accession : YP_005446850.1 Strain : Phycisphaera mikurensis NBRC 102666 Genome accession: NC_017080 Putative virulence/resistance : Unknown Product : type I restriction-modification system restriction subunit Function : - COG functional category : - COG ID : - EC number : 3.1.21.3 Position : 3329289 - 3332504 bp Length : 3216 bp Strand : + Note : protein synonym:type-I restriction enzyme R protein DNA sequence : GTGATCAACGAGGACGCCGTCGAGCAGAAGGCTCTTCGCTGGTTCCAGGACACCGGCTGGGCGTACCTCCACGGGTCGGA GCTGGCCCCGGACGTGGCGCCCGAGCAGCGGGCGGACGGAAAGGCGGTGGTGCTGGCCGGGCGGCTGGCGGAGGCGGTGC GGCGGCTGAACCCGCAGCTGCCGGCCGAGGCGGTGGAGGAGGTGGTGCGGGCGGCAACGCAGCGGGAGCACCCGGACCTC GCCCGGGCCAACGCGGCGTTCCACCGGAGGATGATCGACGGGGTGCCCGTCCGCTTCGAGGATCCTTCCACCGGCGAGAA GGTCCAGGACGTGGCCCGGCTGGTGGACTTCGGCGGAGCCGCGAACAACGACTGGCTGGTGGTGAACCAGCTGGCGATCG CGGGAACCAAGGACGGGCGGCGGCCGGACGTAATCGCCTATCTCAATGGCCTGCCGATCGCGGTGATCGAGCTGAAGAAC CCGGCGGACGAAAAGGCCGACGTGTGGGCGGCGTACCGGCAGCTGCAGACCTACAAGGACGAGATCGGCGAGCTGTTCGT CCGCAACGCGGCGCTGGTGGTGAGCGACGGGATCACGGCGCGGGTCGGGTCGCTGACGGCGAGCCCCGAGTGGTTCCTGC CGTGGCGGGCGGTGAGCGGCGAGGCGGACCAGCCCAAGGTGGAGATGGAGCTGGAGCGGGTCGTCCGCGGGTTCTTCCGG CCGGACCTCCTGCTGGACTACCTGCGGCACTTCATCCTGTTCGAGGGCGAAGAAGACGTCGTGAAGAAGATCGCTGGATA CCACCAGTTCCACGGGGTGCGGGCGGCGGTGGAGGCGACGGTGGTCGCCGCGGACCGCGGCGTGGAAACGGCTCCGGGCG ACGCGGTCCGCGAGCGGCCGGCGGCGGACTGGGGGCGGCGGGTGCCGCGGGGCAGCGGGAAGGCGGGCGTCTTCTGGCAC ACGCAGGGCTCGGGCAAAAGCATTTCCATGGCCATGTACGCGGGCAAGCTGATGCAGCAGCCGGCGATGAACAACCCGAC CCTGGTGGTGGTCACCGACCGCCTTGACCTCGACGGGCAGCTGTTCGCGCAGTTCGCGGCGGCGAAGTCGCTGCTGGGCG AGAAGCCCGACCAGGCGGAGAGCCGGGAGCAGCTGCGCGACTACCTCGACGGCCGGGCCAGCGGCGGGATCGTGTTCACG ACGGTGCAAAAGTTCGCGCCGCTGGACGGGGAGGAGGCGCACCCGGTGCTGAGCGGGCGGAGCAACGTCGTCGTGATCAG CGACGAGGCGCACCGCAGCCAGTACGGGATCAAGCCGACGCTGGACAGGAAGACCGGGCGGTACGTCTACGGCTACGCCA AGCACCTCCGCGATGCCCTTTCGGGGGCGTCGTTCATCGGGTTCACGGGGACGCCGATCAGCAGCGAGGACCGCGACACC CGCGGCGTGTTCGGCGAGTACGTGAGCGTCTACGACATCGCCGACGCCGTGGAGGACGGGGCGACGGTGCAGATCTACTA CGAGAGCCGGCGGGCGAAGCTGGACCTGAACGACGCGGAGATCGAGACGCTCAACCAACAGGTGGACGAGGTCGTCGAGG ACGAGGAGACCGAGGACCGGGAGCGGACCAAGGGCCACTGGGCGCAGCTGGCGAAGCTGGTGGGGGCGCGGCCGCGGCTG GAGGCGATCGCGGACGACCTGCTGGCGCACTTCGACCAGCGGAAGGAGGCGATGGCGTCGCAGGTCGGGCCCGACGGCGG GAAGGCGATGATCGTCACGATGAGCCGGGACATCTGCGTCGCGCTCTTCGACGAGATCGTCCGCCGGCGGCCGGAGATGG CGGGCAGCCGGAAGGACGACGGCACGTGGAACCCCGAGGACGGGTCGATCCGCGTGGTGATGACCGGCACGGCGACCGAT CGGGTTGAGCTGCGGCACCACCAGCACGGCAAGGCCCAGCGCGAGCGGCTGGCCAAGCGGTTCAAGGACCCGGCCGACCC GCTGGAGCTGGTGATCGTGCGGGACATGTGGCTGACCGGCTTCGACGCGCCGTGCTGCCACACGATGTATGTGGACAAGC CGATGCGGGGGCATGCGCTGATGCAGGCGATCGCCCGGGTGAACCGGGTGTTCCGCGAGAAGGCGGGCGGGCTGGTGGTC GACTACATCGGGATCGCCAACGAGCTGAAGCAGGCGCTCAAGACGTACACGGAGAGCAAGGGGCGTGGCCAGCCGACGGT GCGGGCGGAGGACGGGCTTCGCATCCTGAAGGAGAAGGTGGGCGTTCTGCGGGACATGATGCGGGAGAACGGCGGCTTCG CGTACGCGGGCTTCGAGACGCAGCCGTTGGAGCTGCTGCCGGGGGTGACGAACCACCTCCTCGGGCTCGACGACGGCAAG CGGCGCTTCCTGGACGTGATGGCCTCGGTGCTGAAGGCGTTCAGCCTGTGCGCCACGCTGGACGAGGCGGCGGCGCTGCG GACGGAGATCGCGTTCTTCTCGGCCGTCCGCGGCGTGCTCGCCAAGCACGGGCAGGAAGAGCCGAAGCGTGGCGGCGCGG ACAAGAGCGCATCGCTCAAGCTGATCCTGGACAACGCGGTGGTGAGCGAGGGCGTGGACGACATCTTCGCGATGGCGGGG CTGGAGCGGCCGGACATCGGGCTGCTGAGCGAGGGGTTCCTCGAGGACGTGCGGCGGATGCCGGCGAAGAACCTCGCGGT CGAGCTGCTGGAGCGGCTGATCCGCGACGAGATCCGCGGGCGGTCGCGGAACAACGTCGTGCGTGAGAGCCGGTACGGCG AGCGGCTGGCCGAGACGCTGCGGCGGTACAACAACCGGGCGATCGAGTCGGGGGCGGTGGTGGAGGAGCTGATCGCGATG GCGAGGGACTTCGCCGAGGCGGTGCGGCGTGACGAGGACCTGGGGCTGTCGCCAGACGAGATCGCGTTCTACGAGGCGCT CGCGGAGCGGCCGGAGGTGCTCCGGGAGATGGGAGACGAGACGCTCAAGGCGCTGGCGGTGGAGCTGACGGCGAAGCTGC GGGCGAGCACGACGGTGGACTGGCGGGTGCGCGAGAGCGTGCGGGCACGGATGCGGCTGCTGATCAAGCGCCTGCTGCGG AAGCACCGGTACCCGCCGGCGGGCCAAGAGCGGGCGGTGGACGTGGTGATCGCGCAGGCGGAGCGGCTGAGCGAGGGCTG GTCCGCGGCGGGGTGA Protein sequence : MINEDAVEQKALRWFQDTGWAYLHGSELAPDVAPEQRADGKAVVLAGRLAEAVRRLNPQLPAEAVEEVVRAATQREHPDL ARANAAFHRRMIDGVPVRFEDPSTGEKVQDVARLVDFGGAANNDWLVVNQLAIAGTKDGRRPDVIAYLNGLPIAVIELKN PADEKADVWAAYRQLQTYKDEIGELFVRNAALVVSDGITARVGSLTASPEWFLPWRAVSGEADQPKVEMELERVVRGFFR PDLLLDYLRHFILFEGEEDVVKKIAGYHQFHGVRAAVEATVVAADRGVETAPGDAVRERPAADWGRRVPRGSGKAGVFWH TQGSGKSISMAMYAGKLMQQPAMNNPTLVVVTDRLDLDGQLFAQFAAAKSLLGEKPDQAESREQLRDYLDGRASGGIVFT TVQKFAPLDGEEAHPVLSGRSNVVVISDEAHRSQYGIKPTLDRKTGRYVYGYAKHLRDALSGASFIGFTGTPISSEDRDT RGVFGEYVSVYDIADAVEDGATVQIYYESRRAKLDLNDAEIETLNQQVDEVVEDEETEDRERTKGHWAQLAKLVGARPRL EAIADDLLAHFDQRKEAMASQVGPDGGKAMIVTMSRDICVALFDEIVRRRPEMAGSRKDDGTWNPEDGSIRVVMTGTATD RVELRHHQHGKAQRERLAKRFKDPADPLELVIVRDMWLTGFDAPCCHTMYVDKPMRGHALMQAIARVNRVFREKAGGLVV DYIGIANELKQALKTYTESKGRGQPTVRAEDGLRILKEKVGVLRDMMRENGGFAYAGFETQPLELLPGVTNHLLGLDDGK RRFLDVMASVLKAFSLCATLDEAAALRTEIAFFSAVRGVLAKHGQEEPKRGGADKSASLKLILDNAVVSEGVDDIFAMAG LERPDIGLLSEGFLEDVRRMPAKNLAVELLERLIRDEIRGRSRNNVVRESRYGERLAETLRRYNNRAIESGAVVEELIAM ARDFAEAVRRDEDLGLSPDEIAFYEALAERPEVLREMGDETLKALAVELTAKLRASTTVDWRVRESVRARMRLLIKRLLR KHRYPPAGQERAVDVVIAQAERLSEGWSAAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 57 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 42 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 42 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 42 |
