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Name : lysS (PSMK_12460) Accession : YP_005445302.1 Strain : Phycisphaera mikurensis NBRC 102666 Genome accession: NC_017080 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1467723 - 1469405 bp Length : 1683 bp Strand : - Note : protein synonym:lysine--tRNA ligase DNA sequence : ATGAACCCCGACCCCCCGAGAACCGCTCCGCCGCCCAACGCCTCCTCCGCTTCCACCGAGGAGCTGCTGGCCGCCCGGCG GGCCAAGCTCGACAAGCTCCGGAGCGAGCACGGGATCGACCCCTTCGGCACGCGGCAGGACGGGCTCGTCTCGCTCGCCG CCGCCCGGGCGCTGTACGACGCCGAGGCCGATCGCTGGTTCAAGGAGGATCCCGCCTCCGGCGACGACCGGCCGATCGTC GCCGTCGCGGGCCGCGTGGTGCAGCAGCGGCTGATGGGCAACCTGCTCTTCCTGTCGCTGCGGGACCACTCCGGGGTGGA CCTGCAGGTGGCGGTCTCGAAGAAGGCGGTCGGGCCGGAGGCCTTCAAGGTCGCGAAGCTGGTCGACCTCGCGGACCTCG TCGCGGCGCGGGGTCCGCTGGCGCAGACCAAGACCGGCGAGGTGACGGTCTGGGCCGGGCCCGGCGGCGACCCCTCCGCC GATCCGGACGCGTCCTCCGTCGGCATCGAGCACCGGGAGGACCCCACCGGCGGGCTCACCTTCCGCCTGCTCACCAAGAG CCTCGCGCTCCCGCCGGGCAAGTTCCACGGCCTCACCGATCCCGAGCAGCGGTACCGGCGCCGGCACGTCGACCTCTGGA GCAACCCCGAGGGCCTCGCGACGCTGCAGACGCGGTCGAGGCTCATCAAGGCGACCCGCGACTTCTTCGAGGGCCGCGGC TTCCTCGAGGTCGAGACCCCGATGATGCAGCCCGTGCCCGGCGGCGCCGCGGCCCGGCCCTTCGTCACCCACCACAACGC GCTGGACCTGGAGCTGTTCCTGCGGATCGCCCCGGAGCTGTACCTCAAGCGCCTGCTCGTGGGCGGCCTGCCGAGGGTCT TCGAGATCAACCGCAACTTCCGCAACGAGGGCGTGGACCGCAGCCACAACCCCGAGTTCACGATGCTCGAGCTCTACGAG GCCTACGGCGACCTCGAAAGCATCCTCCACCACACCCAGGGCCTCGTCGAGCACCTCGCCGGCGAGGTGCTCGGCTCGCT GAAGCGGCCCTACGGCGACCACGAGATCGACTTCGGCGCCTTCCGCCGGGCGAGCTACCACGACCTCTTCGCCGAGCACA ACGGCTGGGACGCCCGCGGCGAGAAGGGCGCCGCCCGCGTCCTGGCCAAGGCCAGAGCCCTGGGCCTGCAGACCGGCGGC GTCCACCCCGACGTGCTGCTCAACGCGCTGTGGGAGGAGACCGTCGAGAAGCACCTCATCCAGCCGACCTTCGTCGTGGA GTACCCCGCCAGCCTGTGCCCGCTGACGAAGCGGAAGCCCGACGACCCGACGATCGCCGAGCGCTTCGAGCTGTTCGTCG CCGGCATGGAGCTCGCCAACGCCTACACCGAGCTCAACGACCCCGACGTGCAGGAAGCGAACTTCCGCGAGCAGCTCGGC GGCGATGCGGAGGAGAACACCTTCCGCAACCTGGACCTGGACTTCCTCGACGCCCTGAAGGTCGGCATGCCGCCCGCCGG CGGCCTGGGCATCGGCATCGACCGCCTGGTGATGCTGCTGACGAACAAGAGCTCGATCCGGGATGTACTGGCGTTTCCGC TGATGAAGCCGGTGGGGACGCATCCGCTGCGCGGATCGAGCGAGGAAGCGGAGAAGCGAAGAAGCGAAGAAGTCAGCAAG TGA Protein sequence : MNPDPPRTAPPPNASSASTEELLAARRAKLDKLRSEHGIDPFGTRQDGLVSLAAARALYDAEADRWFKEDPASGDDRPIV AVAGRVVQQRLMGNLLFLSLRDHSGVDLQVAVSKKAVGPEAFKVAKLVDLADLVAARGPLAQTKTGEVTVWAGPGGDPSA DPDASSVGIEHREDPTGGLTFRLLTKSLALPPGKFHGLTDPEQRYRRRHVDLWSNPEGLATLQTRSRLIKATRDFFEGRG FLEVETPMMQPVPGGAAARPFVTHHNALDLELFLRIAPELYLKRLLVGGLPRVFEINRNFRNEGVDRSHNPEFTMLELYE AYGDLESILHHTQGLVEHLAGEVLGSLKRPYGDHEIDFGAFRRASYHDLFAEHNGWDARGEKGAARVLAKARALGLQTGG VHPDVLLNALWEETVEKHLIQPTFVVEYPASLCPLTKRKPDDPTIAERFELFVAGMELANAYTELNDPDVQEANFREQLG GDAEENTFRNLDLDFLDALKVGMPPAGGLGIGIDRLVMLLTNKSSIRDVLAFPLMKPVGTHPLRGSSEEAEKRRSEEVSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-83 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005445302.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-83 | 43 |
