Gene Information

Name : pdxS (CLDAP_06630)
Accession : YP_005440600.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 827438 - 828370 bp
Length : 933 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGATTCAAACAACCGCGCCCTCAACGGCGCTATTGAGCAAAACGATGTGATTACAGGCAGCTTCGCCGTCAAGGT
GGGGCTTGCGCAGATGCTCAAAGGCGGAGTCATCATGGACGTCGTCACCGCCGAGCAGGCACGCATCGCCGAAGAAGCGG
GCGCCTGCGCCGTGATGGCACTCGAGCGCGTCCCCGCCGACATTCGCAGAGATGGCGGCGTGGCGCGCATGAGCGACCCG
CGTAAAATCAAAGAGATCATCGAAGCGGTGACGATTCCCGTGATGGCCAAAGTGCGCATCGGGCATTTCGTCGAGGCGCA
AATTTTGCAGGCGCTCGGCGTCGACTACATCGACGAGAGCGAAGTGTTGACGCCGGCGGATGAAGAGCATCATATCAACA
AACATAAATTCACCACGCCGTTCGTCTGCGGCGCTCGCGATCTAGGCGAGGCACTGCGACGCATCGCCGAGGGCGCCGCC
ATGATTCGCACCAAAGGCGAGGCAGGTACCGGCAATATCGTCGAGGCCGTACGCCATGCGCGCGCCGTCAACGGTGCCAT
CCGCCGGCTGCGCAGCATGGATGAGGACGAACTCTTCGCCTATGCCAAGGAAATCCGGGCGCCGTACTCGCTGGTGAAGC
TGACAGCCGAACTGGGACGACTGCCCGTGGTCAACTTTGCAGCCGGCGGAGTTGCCACGCCTGCCGATGCAGCGTTGATG
ATGCAGCTTGGCATGGATGGCGTCTTCGTTGGCTCCGGCATCTTCAAGAGCGGCAACCCAGAAAAACGCGCACGCGCTAT
CGTCATGGCCGTCACACACTACAATGACCCGCAAATTCTGGCAGAAGTGAGCGAGGATCTGGGAGAGCCGATGGTCGGCA
TCAACCTCGACACCCTGAGCGAAGCCGACAAAATGGCGGTGCGTGGGTGGTAA

Protein sequence : 
MNDSNNRALNGAIEQNDVITGSFAVKVGLAQMLKGGVIMDVVTAEQARIAEEAGACAVMALERVPADIRRDGGVARMSDP
RKIKEIIEAVTIPVMAKVRIGHFVEAQILQALGVDYIDESEVLTPADEEHHINKHKFTTPFVCGARDLGEALRRIAEGAA
MIRTKGEAGTGNIVEAVRHARAVNGAIRRLRSMDEDELFAYAKEIRAPYSLVKLTAELGRLPVVNFAAGGVATPADAALM
MQLGMDGVFVGSGIFKSGNPEKRARAIVMAVTHYNDPQILAEVSEDLGEPMVGINLDTLSEADKMAVRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-90 70
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-90 69
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-90 69