Gene Information

Name : CLDAP_39930 (CLDAP_39930)
Accession : YP_005443930.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Virulence
Product : putative molybdopterin oxidoreductase iron-sulfur binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5004229 - 5004957 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence : 
ATGCCCAATGCTATTGTTCAAAAGGAGAACCTGCTTTTACGCATGCAGGAAGATATCCGGCGTGCCCTGAAAAAGCCAGA
AAATGAGCGTCGCTGGGGCATGGTGATCGACACGCGCAAGTGCGTTGGCTGTCATGCCTGCACCATCAGTTGTGTGGCAG
AAAACAAATTGCCGCCTGGCGTCGTCTATCGTCCTGTGCTCGACCAGGAGATTGGAACTTACCCAAATGTCACACGGCGC
TTCATGCCACGGCCTTGTCTGCAGTGTGAAAATCCGCCGTGTGTGCCGGTCTGCCCGGTCAACGCTACCTACACTCGACC
TGATGGCATCGTTGCCATCGATTATGAACAGTGCATCGGTTGCCGCTATTGTATCACTGCCTGCCCCTACTCGGCGCGCA
CCTTTGATGCAGGATACACCTATACAGAGGACACGCCGGAGCAGGAAGTCTATGAGCTCCTGCCGAACTATGAATATGGA
GTAGAGCACCCACGCCAGCCAGGCACCGAGGAGTCCCCCATTGGCAATGCGCGTAAGTGTCACTTCTGCCTCCATCGTTT
AGAACAAGGCCAATTGCCCATGTGCGTGACCACATGCATCGGCGTCGCCAACTATTTTGGCGATTTGAACGATCCCGACA
GCCTGGTGGCAGAGATGGCAGCGCAGCCCAACGCCATCGTGTTGAAAGAAGAACTTGGTACCAAACCCAAAGTGTTCTAC
TTAGTCTGA

Protein sequence : 
MPNAIVQKENLLLRMQEDIRRALKKPENERRWGMVIDTRKCVGCHACTISCVAENKLPPGVVYRPVLDQEIGTYPNVTRR
FMPRPCLQCENPPCVPVCPVNATYTRPDGIVAIDYEQCIGCRYCITACPYSARTFDAGYTYTEDTPEQEVYELLPNYEYG
VEHPRQPGTEESPIGNARKCHFCLHRLEQGQLPMCVTTCIGVANYFGDLNDPDSLVAEMAAQPNAIVLKEELGTKPKVFY
LV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 1e-28 42
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 1e-28 42
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-28 42
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 2e-28 42
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLDAP_39930 YP_005443930.1 putative molybdopterin oxidoreductase iron-sulfur binding subunit VFG0486 Protein 9e-29 42