Gene Information

Name : CLDAP_37410 (CLDAP_37410)
Accession : YP_005443678.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4678266 - 4679030 bp
Length : 765 bp
Strand : -
Note : -

DNA sequence :
TTGATTGCAGAGAACGAAGCCAGCAGCGCAGCCAACAGCGCAGGCAAACGGACGCCGATTATCCGGCTTGAGGGGCTGAC
CAAAGTTTATACGGAAGGGGAAGTAAGTCGCATTGTTCTCGATGAATTGAACCGTGAATTCTATGAAGGCGAGTTTGTCT
GTTTGTTGGGAAAGTCGGGCAGCGGAAAGAGCACACTGCTCAACCTGATCTCTGGCATCGATGCACCGACGCGCGGGGAC
GTCGTCATTTATACGGGGGCCAGGCCGGTGCGGCTGACGGCGCTCAGTGAGCAGGATCGCACGCTCTTTCGCCGCCGCCA
TCTCGGCATCGTCTTCCAATTTTTCAATCTGATTCCAACGTTGACCGTGCTCGAAAATGTCACGTTGCCGCTGGAACTGA
ATGGCTGGGCACAACGCAATGCACAGACGCGCGCCCGTGGGCTGCTCGATCGCGTCGGCCTCGGCGATCGGCTGAAGACC
TTCCCAGACAAGCTGAGCGGCGGCGAACAACAGCGCGTTGCCATCGCTCGCGCCCTGGCACACGACCCCTTGCTGATTCT
TGCCGACGAGCCGACGGGCAACCTCGATGAAGACACCGGCGAGACAGTGCTTTCACTGCTGCTAGAGCTCACGCGCGACG
CCGGTAAGACGCTCTTCATGGCGACGCATGCGCCTGAAGTTGCCCGTCGCGCTGACCGCGTGCTACACCTCGACCACGGC
AAGCTGGTGAGCGACCAGCTCTGGCGACGGTTGCATGAGCCATGA

Protein sequence :
MIAENEASSAANSAGKRTPIIRLEGLTKVYTEGEVSRIVLDELNREFYEGEFVCLLGKSGSGKSTLLNLISGIDAPTRGD
VVIYTGARPVRLTALSEQDRTLFRRRHLGIVFQFFNLIPTLTVLENVTLPLELNGWAQRNAQTRARGLLDRVGLGDRLKT
FPDKLSGGEQQRVAIARALAHDPLLILADEPTGNLDEDTGETVLSLLLELTRDAGKTLFMATHAPEVARRADRVLHLDHG
KLVSDQLWRRLHEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-24 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLDAP_37410 YP_005443678.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-27 46
CLDAP_37410 YP_005443678.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-30 43
CLDAP_37410 YP_005443678.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-31 42
CLDAP_37410 YP_005443678.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-34 41
CLDAP_37410 YP_005443678.1 putative ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-20 41
CLDAP_37410 YP_005443678.1 putative ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-29 41