Gene Information

Name : CLDAP_36970 (CLDAP_36970)
Accession : YP_005443634.1
Strain : Caldilinea aerophila DSM 14535
Genome accession: NC_017079
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4621099 - 4621803 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGCCTATCATTGAACTTTTCGACATCTGCAAAACTTATCACATCGGCGAAGTCGAGACGCGCGCGCTGGATGGTGTTTC
GCTAAGTTTCGAGCCGGGCGAATTCACCGCCATCGTTGGCCCTTCCGGATCAGGTAAAACGACGTTGCTGCAGATCATGG
GATGCCTGGACAAGCCCGACAGTGGGGTTGTGAAGCTTGATGGGCGAGACGTGACCCGGCTGAACGCCGATCAACGCGCA
GAGCTGCGCCGCAACGTAATCGGTTTCATCTTTCAGTTCTTTGCGTTGATCCCAGTGCTGGACGCGTATGAAAATGTCGA
ACTGCCCTTGCTGTTGGCGGGCGTCGGCGCGCGCGAACGCCGGGAACGCACGCTGGAGATGCTCGCAGCCGTTGGGCTAT
CCGATCGCATCCACCATCGACCGAACCAACTGAGCGGCGGTCAGCAGCAGCGCGTGGCGATCGCACGTGCACTGGTAAAG
CGCCCGCTGGTGGTGCTGGCCGATGAGCCGACCGCCAACCTCGACACCGTCAACGGCGAGCAGGCGATGGAGATCATGCA
ACGACTCAACGAGCAGACGGGCACAGCTTTCATCTTCGCTACCCATGACCCGCGCGTCATGAAATTTGCGCGACGCACGA
TCCATTTGGTCGACGGCCGCGTGGCGGAGAACAACGTTGCCACAAAAGTTGCCAACGCACTATGA

Protein sequence : 
MPIIELFDICKTYHIGEVETRALDGVSLSFEPGEFTAIVGPSGSGKTTLLQIMGCLDKPDSGVVKLDGRDVTRLNADQRA
ELRRNVIGFIFQFFALIPVLDAYENVELPLLLAGVGARERRERTLEMLAAVGLSDRIHHRPNQLSGGQQQRVAIARALVK
RPLVVLADEPTANLDTVNGEQAMEIMQRLNEQTGTAFIFATHDPRVMKFARRTIHLVDGRVAENNVATKVANAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLDAP_36970 YP_005443634.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-45 50
CLDAP_36970 YP_005443634.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-44 46
CLDAP_36970 YP_005443634.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-37 44
CLDAP_36970 YP_005443634.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLDAP_36970 YP_005443634.1 putative ABC transporter ATP-binding protein VFG0869 Protein 3e-21 41