|
Name : ureC (CLDAP_03160) Accession : YP_005440253.1 Strain : Caldilinea aerophila DSM 14535 Genome accession: NC_017079 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : - COG ID : - EC number : - Position : 418435 - 420150 bp Length : 1716 bp Strand : - Note : - DNA sequence : ATGACGCTGCAAATACCGCGACAGACCTATGTCGATCTCTATGGCCCCACCACAGGCGACCGAGTACGTTTGGCTGACAC GGATCTGTTCATTGAAGTCGAACGCGACTATACGATCTACGGAGACGAGGTGACTTTTGGCGGCGGCAAGGTGATTCGAG ATGGAATGGGGCAGCGCAGTCGCGCGCTGCGCAGCGAGGCGTTAGACCTGGTGATCACCAACGCTCTGATTCTCGACTAC TGGGGTATTGTGAAAGGCGACATCGGCGTCAAAGATGGCCGTGTTGTGAAGGTAGGTAAGGCGGGGAATCCAGACACCAT GGCAGGCGTCGATCCAGAGTTGGTGATCGGGCCGACTACTGAAGTGATTGCAGGGGAACATCTGATCGTCACTCCAGGGG CCATCGACAGTCATATTCATTTCATCTCACCGCAACAAATTTATGAAGCGCTTTCCAGCGGTGTTACCACGATGATAGGC GGCGGCACCGGCCCCGCTACCGGCTCCAATGCCACTACATGCACACCTGGCGCTTGGAACCTGGCGCGGATGCTGCAGGC TGCAGAAGCATGGCCGATGAACTTCGGTTTCCTGGGCAAAGGCAATGCCGCAGACCCGGCTCCGCTGGCCGAGCAACTGG AGGCTGGCGCCTGCGGTCTAAAGCTTCACGAGGACTGGGGGGCTACACCTGCCGCCATCGACGCCTGCATGCGCGTGGCC GAGGCGTATGATGTTCAGATCGCCATCCATACCGACACCCTCAACGAAGCTGGCTTTGTGGAAGACACCATTGCGGCCAT CGCCGGTCGCACCATTCACACCTACCATACCGAAGGCGCTGGCGGCGGACATGCACCTGACATCATCCGGATCGCCGGTT ATCCTTTCGTATTGCCTTCCTCCACCAACCCAACTCGTCCATATACGATTAATACCATAGCCGAGCATCTTGATATGCTC ATGGTCTGTCATCATCTCAATCCTCAAGTGCCGGAAGATGTGGCATTTGCTGAGAGTCGCATTCGCGCCGAGACCATTGC AGCCGAGGATATTCTCCACGATCTCGGCGTGATCAGCATGATTGCCAGCGATTCGCAGGCCATGGGCCGGGTGGGGGAGG TGATCATTCGTACTTGGCAGACGGCCCATAAGATGAAGGTTCAGCGAGGCCCTCTTGCGCCGGACACGGCGCGTCATGAT AACTTTCGAGCCAAGCGTTATGTTGCCAAATACACCATAAACCCAGCCATCACGCACGGCATCGCCCATGAAGTAGGCTC GATTGAGCCAGGCAAGCTGGCGGACCTCGTGTTATGGAAACCGGCTTTTTTTGGCGTCAAACCAGAGATGGTGATCAAAG GAGGCTTTATCGTTTGGAGCGTCATGGGTGACGCCAACGCCTCCATTCCCACGCCACAGCCGGTACTCTATCGTCCAATG TTCGGGAGTTTTGGCTATGCGGTTGCTCCTTTAAGCCTGACGTTTATGTCTCAGGCAGCCATTGCCGCCGGTGTGCCCGA GGCATTGAGACTTCGCAAGACCGTGGCGCCGGTCATCAACTGTCGACGTATCGGCAAAGCGGACATGGTGCACAACAACG CTATGCCCGAAATTCATGTCGACCCGGAGACTTACGAGGTGCGCGTGGATGGCGAGCTACTGACCTGTGAACCTGCGAAT TCTTTGCCTATGACGCAACGCTATTTTCTCTTTTAA Protein sequence : MTLQIPRQTYVDLYGPTTGDRVRLADTDLFIEVERDYTIYGDEVTFGGGKVIRDGMGQRSRALRSEALDLVITNALILDY WGIVKGDIGVKDGRVVKVGKAGNPDTMAGVDPELVIGPTTEVIAGEHLIVTPGAIDSHIHFISPQQIYEALSSGVTTMIG GGTGPATGSNATTCTPGAWNLARMLQAAEAWPMNFGFLGKGNAADPAPLAEQLEAGACGLKLHEDWGATPAAIDACMRVA EAYDVQIAIHTDTLNEAGFVEDTIAAIAGRTIHTYHTEGAGGGHAPDIIRIAGYPFVLPSSTNPTRPYTINTIAEHLDML MVCHHLNPQVPEDVAFAESRIRAETIAAEDILHDLGVISMIASDSQAMGRVGEVIIRTWQTAHKMKVQRGPLAPDTARHD NFRAKRYVAKYTINPAITHGIAHEVGSIEPGKLADLVLWKPAFFGVKPEMVIKGGFIVWSVMGDANASIPTPQPVLYRPM FGSFGYAVAPLSLTFMSQAAIAAGVPEALRLRKTVAPVINCRRIGKADMVHNNAMPEIHVDPETYEVRVDGELLTCEPAN SLPMTQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 1e-177 | 67 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 1e-177 | 67 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 7e-160 | 63 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 7e-161 | 62 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 7e-161 | 62 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 7e-161 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureC | YP_005440253.1 | urease subunit alpha | VFG0270 | Protein | 4e-167 | 64 |
